RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KLK2P20151 261 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 CCNA2P20248 432 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 CXCR1P25024 350 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 ACVR2AP27037 513 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 SRYQ05066 204 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 RBPJQ06330 500 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 MYBPHQ13203 477 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 PLXDC2Q6UX71 529 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 C3P1Q6ZMU1 363 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 TMPPEQ6ZT21 453 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 ATCAYQ86WG3 371 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 PAPD5Q8NDF8 572 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 CANT1Q8WVQ1 401 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 MPP4Q96JB8 637 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 TMEM43Q9BTV4 400 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 POTEKPQ9BYX7 375 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 SERINC1Q9NRX5 453 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 SLC7A7Q9UM01 511 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 DOCK7Q96N67 2140 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 ARHGAP21Q5T5U3 1957 aa13.31□□□□□ -0.28
MTHFD1-204ENST00000553405 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 NCOA6Q14686 2063 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 DHRS12A0PJE2 317 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CLEC18AA5D8T8 446 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CD8B2A6NJW9 211 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CLCA1A8K7I4 914 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 A8MVM7 634 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 H0Y3Z8 333 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 EIF1AYO14602 144 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 PRRG2O14669 202 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CXCL13O43927 109 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 TOXO94900 526 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 TGM6O95932 706 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 HOXD4P09016 255 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 RHCEP18577 417 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 PTGER4P35408 488 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 TAS2R41P59536 307 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 H3F3AP84243 136 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 LTBQ06643 244 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 SRSF1Q07955 248 aaKnown RBP eCLIP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 C1orf185Q5T7R7 199 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 NSUN5P2Q63ZY6 315 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 ZNF585AQ6P3V2 769 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CLEC18BQ6UXF7 455 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 P3H2Q8IVL5 708 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 MEIOBQ8N635 442 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 CLEC18CQ8NCF0 446 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 ATP6V1C2Q8NEY4 427 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 POP5Q969H6 163 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 DUS3LQ96G46 650 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 TRIM15Q9C019 465 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 NMNAT1Q9HAN9 279 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 MEPEQ9NQ76 525 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 RHCGQ9UBD6 479 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 TRAPPC4Q9Y296 219 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 MEMO1Q9Y316 297 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 HDGFL3Q9Y3E1 203 aa13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 SPIN1Q9Y657 262 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-204ENST00000553405 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MBD3L4A6NDZ8 208 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MBD3L3A6NE82 208 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MBD3L5A6NJ08 208 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 LIPT2A6NK58 231 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 FIGNL2A6NMB9 653 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 GJE1A6NN92 205 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ZNF814B7Z6K7 855 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 E9PLN8 166 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 PMS2P2O95744 297 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MT-ND1P03886 318 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 FABP3P05413 133 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 GPIP06744 558 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 GLI4P10075 376 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 UMPSP11172 480 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 GABRA1P14867 456 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 LIMS1P48059 325 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 DIO1P49895 249 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 P2RY4P51582 365 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 AGFG1P52594 562 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 UGT2B15P54855 530 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 RAC3P60763 192 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ACTR3P61158 418 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 DGCR6Q14129 220 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 GUSBP1Q15486 140 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ZNF239Q16600 458 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 C1orf140Q5VVS0 124 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 HBMQ6B0K9 141 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MYO7BQ6PIF6 2116 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-204ENST00000553405 MED12LQ86YW9 2145 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms