RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 HSP90AA5PQ58FG0 334 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 KRT80Q6KB66 452 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 LRP11Q86VZ4 500 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 C1orf174Q8IYL3 243 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 CEP70Q8NHQ1 597 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 FBXO27Q8NI29 283 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 ACTRT2Q8TDY3 377 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 ALG3Q92685 438 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 UBE2E3Q969T4 207 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 PDLIM5Q96HC4 596 aaKnown RBP6.96□□□□□ -1.3
PRIM1-208ENST00000552590 ARL5BQ96KC2 179 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 NOX4Q9NPH5 578 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 MYEF2Q9P2K5 600 aaKnown RBP6.96□□□□□ -1.3
PRIM1-208ENST00000552590 CACNG2Q9Y698 323 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 POMT1Q9Y6A1 747 aa6.96□□□□□ -1.3
PRIM1-208ENST00000552590 KMT2AQ03164 3969 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 IGHV2OR16-5A0A0B4J2B6 119 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 TCRBV7S3A2A0A539 114 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 E9PQ18 207 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 AP3B1O00203 1094 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 NR5A2O00482 541 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 BCAS2O75934 225 aaPredicted RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 BPNT1O95861 308 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 IGHMP01871 453 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 SERPINB1P30740 379 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 CETN2P41208 172 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 EIF1P41567 113 aaKnown RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 EVX1P49640 407 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 PRIM2P49643 509 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 BASP1P80723 227 aaKnown RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 ZNF155Q12901 538 aaPredicted RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 DAG1Q14118 895 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 TSNQ15631 228 aaKnown RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 DECR1Q16698 335 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 ERCC6LQ2NKX8 1250 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 C1QTNF12Q5T7M4 302 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 TSPO2Q5TGU0 170 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 FRG2Q64ET8 278 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 SLC48A1Q6P1K1 146 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 CASP12Q6UXS9 341 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 FRA10AC1Q70Z53 315 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 NUDT13Q86X67 352 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 SSMEM1Q8WWF3 244 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 KLHL29Q96CT2 875 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 R3HDM4Q96D70 268 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 CNRIP1Q96F85 164 aaPredicted RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 TSGA10Q9BZW7 698 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 GPATCH2Q9NW75 528 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 CRNNQ9UBG3 495 aaPredicted RBP6.95□□□□□ -1.3
PRIM1-208ENST00000552590 FOXJ3Q9UPW0 622 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
PRIM1-208ENST00000552590 ISPDA4D126 451 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 ZNF716A6NP11 495 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 CLDN25C9JDP6 229 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 STK16O75716 305 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 IGLV1-44P01699 117 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 PTX3P26022 381 aaPredicted RBP6.94□□□□□ -1.3
PRIM1-208ENST00000552590 MPGP29372 298 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 RPL4P36578 427 aaKnown RBP6.94□□□□□ -1.3
PRIM1-208ENST00000552590 GP5P40197 560 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 ARFIP1P53367 373 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 TERF1P54274 439 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 RWDD2BP57060 319 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 CCL8P80075 99 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 PAX8Q06710 450 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 NR1I3Q14994 352 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 OASLQ15646 514 aaKnown RBP6.94□□□□□ -1.3
PRIM1-208ENST00000552590 KCTD19Q17RG1 926 aaPredicted RBP6.94□□□□□ -1.3
PRIM1-208ENST00000552590 ALKBH6Q3KRA9 238 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 TBRG1Q3YBR2 411 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 ABLIM2Q6H8Q1 611 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 OR7G2Q8NG99 324 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 OR9A2Q8NGT5 310 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 CALML6Q8TD86 181 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 DDB2Q92466 427 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 CFHR4Q92496 578 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 RAB1CQ92928 201 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 UPRTQ96BW1 309 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 OR5B2Q96R09 309 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 ASCL2Q99929 193 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 OBP2BQ9NPH6 170 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 PAK5Q9P286 719 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 GRID1Q9ULK0 1009 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 FZR1Q9UM11 496 aa6.94□□□□□ -1.3
PRIM1-208ENST00000552590 AGAP5A6NIR3 686 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 MGRN1O60291 552 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 CCNT2O60583 730 aaKnown RBP6.93□□□□□ -1.3
PRIM1-208ENST00000552590 SKAP2O75563 359 aaPredicted RBP6.93□□□□□ -1.3
PRIM1-208ENST00000552590 IGKV1D-16P01601 117 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 IGHV4-59P01825 116 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 GYPCP04921 128 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 PIK3CBP42338 1070 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 CRYBB2P43320 205 aa6.93□□□□□ -1.3
PRIM1-208ENST00000552590 HADHBP55084 474 aaKnown RBP6.93□□□□□ -1.3
PRIM1-208ENST00000552590 UBE2NP61088 152 aaKnown RBP6.93□□□□□ -1.3
PRIM1-208ENST00000552590 SEC61A1P61619 476 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms