RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 YAE1D1Q9NRH1 226 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 EXD2Q9NVH0 621 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 TAS2R16Q9NYV7 291 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 NPAP1Q9NZP6 1156 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SLC17A7Q9P2U7 560 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 LGALS13Q9UHV8 139 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 ZDHHC2Q9UIJ5 367 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 KCNE5Q9UJ90 142 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 MKLN1Q9UL63 735 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 MGAT4BQ9UQ53 548 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 SLC35A3Q9Y2D2 325 aa6.72□□□□□ -1.33
NEK3-201ENST00000550331 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 TLDC2A0PJX2 215 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ZNF716A6NP11 495 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 GPR171O14626 319 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 NDUFS7O75251 213 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 SPAG7O75391 227 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 CYP7B1O75881 506 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 BPGMP07738 259 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 DHRS4L1P0CG22 281 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 TTKP33981 857 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 PGM1P36871 562 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 SLC16A1P53985 500 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 DSCR9P59020 149 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 PGS1Q32NB8 556 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 C1QTNF12Q5T7M4 302 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ATAD3BQ5T9A4 648 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ANXA8L1Q5VT79 327 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 OR4F3Q6IEY1 312 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 OR7E24Q6IFN5 339 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 TYW3Q6IPR3 259 aaKnown RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 KLHL17Q6TDP4 642 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 GRINAQ7Z429 371 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 CLECL1Q8IZS7 167 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ZNF433Q8N7K0 673 aaPredicted RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 OR2W6PQ8NHA6 318 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 PIGXQ8TBF5 258 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 APH1AQ96BI3 265 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 CCDC106Q9BWC9 280 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ROPN1BQ9BZX4 212 aaPredicted RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 OR51I1Q9H343 314 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ROPN1Q9HAT0 212 aaPredicted RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 EXOSC3Q9NQT5 275 aaKnown RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 CBLN4Q9NTU7 201 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 ASB6Q9NWX5 421 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 MALT1Q9UDY8 824 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 CHRNA9Q9UGM1 479 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 PCDHGB4Q9UN71 923 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 B3GALT5Q9Y2C3 310 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 NOSIPQ9Y314 301 aaKnown RBP6.71□□□□□ -1.34
NEK3-201ENST00000550331 HDGFL3Q9Y3E1 203 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 SLC25A15Q9Y619 301 aa6.71□□□□□ -1.34
NEK3-201ENST00000550331 A0A096LNT2 108 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 PRSS51A0A1B0GVH4 220 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 CIB4A0PJX0 185 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 A8MV72 311 aaPredicted RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 C9JVG2 144 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 H7C417 338 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 TYROBPO43914 113 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 SSX4O60224 188 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 EIF1BO60739 113 aaKnown RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 RAD51DO75771 328 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 TFPIP10646 304 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 UQCRC2P22695 453 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 CD40P25942 277 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ETV4P43268 484 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 HTR3AP46098 478 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 MAP2K6P52564 334 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 NUDT6P53370 316 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 IRX1P78414 480 aaPredicted RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 KCNJ10P78508 379 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 TXNL4AP83876 142 aaKnown RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 H3F3AP84243 136 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 IFFO1Q0D2I5 559 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 MAPK14Q16539 360 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 DPY19L1Q2PZI1 675 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 CHRFAM7AQ494W8 412 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 C11orf71Q6IPW1 123 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ZNF544Q6NX49 715 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 EMBQ6PCB8 327 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 SLC22A25Q6T423 547 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 CLEC2AQ6UVW9 174 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 LRRC34Q8IZ02 419 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 KIRREL3Q8IZU9 778 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 CLEC4FQ8N1N0 589 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 DEPDC4Q8N2C3 294 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 UBE2J2Q8N2K1 259 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 C17orf78Q8N4C9 275 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
NEK3-201ENST00000550331 VPS37AQ8NEZ2 397 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 OR10H5Q8NGA6 315 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 OR4A15Q8NGL6 344 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 OR52N5Q8NH56 324 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ZNF563Q8TA94 476 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 TESCQ96BS2 214 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ROPN1LQ96C74 230 aa6.7□□□□□ -1.34
NEK3-201ENST00000550331 ARL5BQ96KC2 179 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms