RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 AMBRA1Q9C0C7 1298 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 PPCSQ9HAB8 311 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 LPAR3Q9UBY5 353 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 HDGFL3Q9Y3E1 203 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 SPIN1Q9Y657 262 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-222ENST00000550274 ATP23Q9Y6H3 246 aa11.02□□□□□ -0.65
LETMD1-222ENST00000550274 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 ATP6V1G2-DDX39BF2Z307 99 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 DNPH1O43598 174 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 LMX1BO60663 402 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 C1QCP02747 245 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 OR12D1P0DN82 309 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-222ENST00000550274 CLDN8P56748 225 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 OR2B6P58173 313 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
LETMD1-222ENST00000550274 TNFAIP8L2Q6P589 184 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-222ENST00000550274 FRRS1Q6ZNA5 592 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 HOMEZQ8IX15 550 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 MIPOL1Q8TD10 442 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 SLC17A5Q9NRA2 495 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 EXD2Q9NVH0 621 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 WDR45Q9Y484 360 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 FLVCR1Q9Y5Y0 555 aa11.01□□□□□ -0.65
LETMD1-222ENST00000550274 PRAMEF27A3QJZ7 478 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 VWC2LB2RUY7 222 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 RNASET2O00584 256 aaKnown RBP11□□□□□ -0.65
LETMD1-222ENST00000550274 AP3D1O14617 1153 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 ANKRD28O15084 1053 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 SCN2BO60939 215 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 SPAG7O75391 227 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 CSF3P09919 207 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 IMPDH2P12268 514 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 APOBEC3AP31941 199 aaPredicted RBP11□□□□□ -0.65
LETMD1-222ENST00000550274 MAGEA8P43361 318 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 PHC1P78364 1004 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 GGTLC2Q14390 218 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 MST1LQ2TV78 715 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 TSPO2Q5TGU0 170 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 ANKRD46Q86W74 232 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 C1orf162Q8NEQ5 155 aaPredicted RBP11□□□□□ -0.65
LETMD1-222ENST00000550274 OR4A15Q8NGL6 344 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 XAGE5Q8WWM1 108 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 CNOT9Q92600 299 aaKnown RBP11□□□□□ -0.65
LETMD1-222ENST00000550274 ROPN1LQ96C74 230 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 SORCS2Q96PQ0 1159 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 PRR14Q9BWN1 585 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 SAP130Q9H0E3 1048 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 CHODLQ9H9P2 273 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 FKRPQ9H9S5 495 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 TMEM181Q9P2C4 612 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 UPB1Q9UBR1 384 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 DCTN4Q9UJW0 460 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
LETMD1-222ENST00000550274 TMED7-TICAM2A0A0A6YYA0 188 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 TLDC2A0PJX2 215 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 TMEM72A0PK05 275 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 ZC3H12DA2A288 527 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 C8BP07358 591 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 GUSBP08236 651 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 SRD5A1P18405 259 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 THBS2P35442 1172 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 IDH2P48735 452 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 CLK1P49759 484 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 GZMKP49863 264 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 KCNJ10P78508 379 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 EMX2Q04743 252 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 CHRNB3Q05901 458 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 SLC17A1Q14916 467 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 SWI5Q1ZZU3 235 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 ATAD3BQ5T9A4 648 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 SAXO2Q658L1 398 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 KIF18AQ8NI77 898 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 TCP10LQ8TDR4 215 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 OIT3Q8WWZ8 545 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 C3orf49Q96BT1 292 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 MSI2Q96DH6 328 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 FBXO17Q96EF6 278 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 PPP1R36Q96LQ0 422 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 EXOSC3Q9NQT5 275 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 POLE3Q9NRF9 147 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 ASIC5Q9NY37 505 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 NOP53Q9NZM5 478 aaKnown RBP10.99□□□□□ -0.65
LETMD1-222ENST00000550274 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 MOKQ9UQ07 419 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 SLC9A8Q9Y2E8 581 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 AMDHD2Q9Y303 409 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 TMED7Q9Y3B3 224 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 PMF1-BGLAPU3KQ54 211 aa10.99□□□□□ -0.65
LETMD1-222ENST00000550274 DYSFO75923 2080 aa10.98□□□□□ -0.65
LETMD1-222ENST00000550274 IGHV4-61A0A0C4DH41 118 aa10.98□□□□□ -0.65
LETMD1-222ENST00000550274 CPSF4O95639 269 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms