RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 MED20Q9H944 212 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF304Q9HCX3 659 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 NRIP3Q9NQ35 241 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 TIGARQ9NQ88 270 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 PNO1Q9NRX1 252 aaKnown RBP8.21□□□□□ -1.1
TMEM116-209ENST00000550020 CA14Q9ULX7 337 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 IER3IP1Q9Y5U9 82 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 BRCA2P51587 3418 aa8.21□□□□□ -1.1
TMEM116-209ENST00000550020 IGKV3D-11A0A0A0MRZ8 115 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 IGHV5-51A0A0C4DH38 117 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 A0A1B0GX78 115 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CD8B2A6NJW9 211 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 HSPB2A8KAH6 182 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TGFBR3LH3BV60 316 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 PHYHO14832 338 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TO15178 435 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 OGG1O15527 345 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CDC40O60508 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CCNKO75909 580 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 PIAS2O75928 621 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 GLCEO94923 617 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 UTS2O95399 124 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 LALBAP00709 142 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 RENP00797 406 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CD8BP10966 210 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ALAS2P22557 587 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 AZGP1P25311 298 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 RBMS1P29558 406 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CASP3P42574 277 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 NR4A2P43354 598 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 BLVRAP53004 296 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 SLC37A1P57057 533 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 DAB2P98082 770 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 SKP2Q13309 424 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 SF3A2Q15428 464 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 HSPB2Q16082 182 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CDONQ4KMG0 1287 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF362Q5T0B9 420 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 IDNKQ5T6J7 187 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 RSBN1Q5VWQ0 802 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 BICRALQ6AI39 1079 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 DMKNQ6E0U4 476 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 WDR74Q6RFH5 385 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 PLET1Q6UQ28 207 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TTLL10Q6ZVT0 673 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TRILQ7L0X0 811 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 OVCH1Q7RTY7 1134 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 FAM220AQ7Z4H9 259 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 CEACAM19Q7Z692 300 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 MISPQ8IVT2 679 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 UBQLNLQ8IYU4 475 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 Q8N402 240 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 D2HGDHQ8N465 521 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 FAM160A2Q8N612 972 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 C17orf47Q8NEP4 570 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 IL17RDQ8NFM7 739 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 OR4C3Q8NH37 302 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF563Q8TA94 476 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 PHOSPHO1Q8TCT1 267 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 PTPMT1Q8WUK0 201 aaPredicted RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 C3orf49Q96BT1 292 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ZC3HAV1LQ96H79 300 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TBX5Q99593 518 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ISG20L2Q9H9L3 353 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 NANSQ9NR45 359 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 LANCL2Q9NS86 450 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ABRACLQ9P1F3 81 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 SEMA5BQ9P283 1151 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 MUTYHQ9UIF7 546 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF221Q9UK13 617 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 HIF3AQ9Y2N7 669 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
TMEM116-209ENST00000550020 TMEM14AQ9Y6G1 99 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
TMEM116-209ENST00000550020 IGHV1OR21-1A0A087WYE8 117 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 A0A1B0GTQ1 180 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 TCRBV16S1A1N1A0A5B0 115 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 HMX3A6NHT5 357 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 CENPXA8MT69 81 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 BCAT2O15382 392 aaPredicted RBP8.19□□□□□ -1.1
TMEM116-209ENST00000550020 FLRT2O43155 660 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 LRRTM2O43300 516 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 HPGDSO60760 199 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 RFPL3O75679 317 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 SLC25A12O75746 678 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 ZNF432O94892 652 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 TXNDC12O95881 172 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 MT-ATP6P00846 226 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 CD14P08571 375 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 MRPL3P09001 348 aaKnown RBP8.19□□□□□ -1.1
TMEM116-209ENST00000550020 CSF3P09919 207 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 HIST1H1CP16403 213 aaKnown RBP8.19□□□□□ -1.1
TMEM116-209ENST00000550020 PGCP20142 388 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 RAB3BP20337 219 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 CXCR1P25024 350 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 MAPK3P27361 379 aaPredicted RBP8.19□□□□□ -1.1
TMEM116-209ENST00000550020 PYCR1P32322 319 aa8.19□□□□□ -1.1
TMEM116-209ENST00000550020 DDOSTP39656 456 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms