RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PM20D2Q8IYS1 436 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 DDIT4LQ96D03 193 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 ADGRG7Q96K78 797 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 NMNAT1Q9HAN9 279 aaPredicted RBP19.05■□□□□ 0.64
VPS29-206ENST00000549578 TESMINQ9Y4I5 508 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 A8MVM7 634 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 THRBP10828 461 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 MAP2K6P52564 334 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 EGR4Q05215 589 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 ESPNLQ6ZVH7 1005 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 ZNF605Q86T29 641 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 GALNT11Q8NCW6 608 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 PIK3C3Q8NEB9 887 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 OR2V1Q8NHB1 315 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 TMEM255BQ8WV15 326 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 MPP4Q96JB8 637 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 TUBA1CQ9BQE3 449 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 COQ10BQ9H8M1 238 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 CCM2LQ9NUG4 571 aaPredicted RBP19.05■□□□□ 0.64
VPS29-206ENST00000549578 SH3BGRL2Q9UJC5 107 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 TINAGQ9UJW2 476 aa19.05■□□□□ 0.64
VPS29-206ENST00000549578 PRRG2O14669 202 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 ADAMDEC1O15204 470 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 FKBP6O75344 327 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 H1F0P07305 194 aaKnown RBP19.04■□□□□ 0.64
VPS29-206ENST00000549578 EIF1AXP47813 144 aaKnown RBP19.04■□□□□ 0.64
VPS29-206ENST00000549578 UQCRFS1P47985 274 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 SPIBQ01892 262 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 MYBPHQ13203 477 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 TRAM2Q15035 370 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 HBMQ6B0K9 141 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 C3P1Q6ZMU1 363 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 Q6ZPB1 254 aaPredicted RBP19.04■□□□□ 0.64
VPS29-206ENST00000549578 OR10D3Q8NH80 312 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 ZNF845Q96IR2 970 aaPredicted RBP19.04■□□□□ 0.64
VPS29-206ENST00000549578 ZNF347Q96SE7 839 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 OSGIN2Q9Y236 505 aa19.04■□□□□ 0.64
VPS29-206ENST00000549578 KPNA4O00629 521 aaPredicted RBP19.03■□□□□ 0.64
VPS29-206ENST00000549578 CXCL13O43927 109 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 NPIPB7O75200 414 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 GNLYP22749 145 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 FKBP2P26885 142 aaKnown RBP19.03■□□□□ 0.64
VPS29-206ENST00000549578 RRM2P31350 389 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 C1orf140Q5VVS0 124 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 TTC33Q6PID6 262 aaPredicted RBP19.03■□□□□ 0.64
VPS29-206ENST00000549578 PLXDC2Q6UX71 529 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 DOLPP1Q86YN1 238 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 PAPD5Q8NDF8 572 aaKnown RBP19.03■□□□□ 0.64
VPS29-206ENST00000549578 OR52J3Q8NH60 311 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 STK35Q8TDR2 534 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 KTI12Q96EK9 354 aaPredicted RBP19.03■□□□□ 0.64
VPS29-206ENST00000549578 TMEM43Q9BTV4 400 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 ZNF426Q9BUY5 554 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 POLEQ07864 2286 aa19.03■□□□□ 0.64
VPS29-206ENST00000549578 KDM4EB2RXH2 506 aaPredicted RBP19.02■□□□□ 0.64
VPS29-206ENST00000549578 RRP9O43818 475 aaKnown RBP19.02■□□□□ 0.64
VPS29-206ENST00000549578 IMPDH2P12268 514 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 CLK1P49759 484 aaKnown RBP19.02■□□□□ 0.64
VPS29-206ENST00000549578 LSM11P83369 360 aaKnown RBP eCLIP19.02■□□□□ 0.649e-7■■■□□ 16.4
VPS29-206ENST00000549578 FGD3Q5JSP0 725 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 ZNF771Q7L3S4 317 aaPredicted RBP19.02■□□□□ 0.64
VPS29-206ENST00000549578 ATCAYQ86WG3 371 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 TMEM239Q8WW34 195 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 OSTF1Q92882 214 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 DHRS1Q96LJ7 313 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 SRXN1Q9BYN0 137 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 POTEKPQ9BYX7 375 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 HDGFL3Q9Y3E1 203 aa19.02■□□□□ 0.64
VPS29-206ENST00000549578 TRGV8A0A0C4DH27 118 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 A0A1W2PRQ8 180 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 FIGNL2A6NMB9 653 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 CLCA1A8K7I4 914 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 ENTPD5O75356 428 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 AHSA1O95433 338 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 RPS5P46782 204 aaKnown RBP19.01■□□□□ 0.63
VPS29-206ENST00000549578 DIO1P49895 249 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 UGT2B15P54855 530 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 CARD18P57730 90 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 RPS3AP61247 264 aaKnown RBP19.01■□□□□ 0.63
VPS29-206ENST00000549578 DGCR6Q14129 220 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 SGCBQ16585 318 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 ACSF3Q4G176 576 aaPredicted RBP19.01■□□□□ 0.63
VPS29-206ENST00000549578 TMPPEQ6ZT21 453 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 CHMP1BQ7LBR1 199 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 PFN4Q8NHR9 129 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 PYDC1Q8WXC3 89 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 PTDSS2Q9BVG9 487 aa19.01■□□□□ 0.63
VPS29-206ENST00000549578 TRBV4-1A0A0J9YWV2 114 aa19■□□□□ 0.63
VPS29-206ENST00000549578 AHRRA9YTQ3 701 aa19■□□□□ 0.63
VPS29-206ENST00000549578 SULT2B1O00204 365 aa19■□□□□ 0.63
VPS29-206ENST00000549578 WDR1O75083 606 aa19■□□□□ 0.63
VPS29-206ENST00000549578 TIPRLO75663 272 aa19■□□□□ 0.63
VPS29-206ENST00000549578 GADD45GO95257 159 aa19■□□□□ 0.63
VPS29-206ENST00000549578 CST1P01037 141 aa19■□□□□ 0.63
VPS29-206ENST00000549578 HOXB6P17509 224 aaKnown RBP19■□□□□ 0.63
VPS29-206ENST00000549578 IDUAP35475 653 aa19■□□□□ 0.63
VPS29-206ENST00000549578 RBM34P42696 430 aaKnown RBP19■□□□□ 0.63
VPS29-206ENST00000549578 EIF2S3LQ2VIR3 472 aaKnown RBP19■□□□□ 0.63
VPS29-206ENST00000549578 PDSS1Q5T2R2 415 aa19■□□□□ 0.63
VPS29-206ENST00000549578 OR2T5Q6IEZ7 315 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms