RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GGNQ86UU5 652 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 KRT73Q86Y46 540 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 KLBQ86Z14 1044 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 EID2Q8N6I1 236 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 NUP43Q8NFH3 380 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OSTF1Q92882 214 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 PPP1R14BQ96C90 147 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM204Q9BSN7 226 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 MTG2Q9H4K7 406 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SEMA4BQ9NPR2 832 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SIGLEC7Q9Y286 467 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 B3GALT5Q9Y2C3 310 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SNX8Q9Y5X2 465 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF780BQ9Y6R6 833 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM233B4DJY2 109 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 B4DXG7 233 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 K7ENP7 123 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 IFNL4K9M1U5 179 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 GYG2O15488 501 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TPST2O60704 377 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 DNAJB6O75190 326 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ANXA2P07355 339 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CD55P08174 381 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CELA2BP08218 269 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CD8BP10966 210 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 FOLR1P15328 257 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 PPP3CBP16298 524 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 HTR2AP28223 471 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 CCT3P49368 545 aaKnown RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 PPP5CP53041 499 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TAS2R50P59544 299 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 NHLH1Q02575 133 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ST3GAL3Q11203 375 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 MEP1AQ16819 746 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 FAM174BQ3ZCQ3 159 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 XAF1Q6GPH4 301 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 INO80CQ6PI98 192 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 FAM111BQ6SJ93 734 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 UTS2BQ765I0 119 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TMPRSS11BQ86T26 416 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 TAGAPQ8N103 731 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 OR8H3Q8N146 312 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 C8orf31Q8N9H6 132 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 SNX31Q8N9S9 440 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF596Q8TC21 504 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 PIGTQ969N2 578 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 NEIL1Q96FI4 390 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 KCTD14Q9BQ13 255 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 INPP5KQ9BT40 448 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 COL25A1Q9BXS0 654 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 NIPAL2Q9H841 368 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 LPAR3Q9UBY5 353 aa4.41□□□□□ -1.7
SCAF11-212ENST00000549162 ING1Q9UK53 422 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-212ENST00000549162 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 LOC102723532A0A0G2JNH3 316 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 A0A0J9YVX5 310 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 UBE2CO00762 179 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 B3GALNT1O75752 331 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SNAPC5O75971 98 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 LINC00032P0C843 101 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 XKP51811 444 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 RPL38P63173 70 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ACTC1P68032 377 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ACTA1P68133 377 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SNCBQ16143 134 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 DCAF12Q5T6F0 453 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 CLEC6AQ6EIG7 209 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 PPP1R3BQ86XI6 285 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A1Q86YD7 464 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 OR4N4Q8N0Y3 316 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 NLGN4YQ8NFZ3 816 aaPredicted RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM163Q8TC26 289 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ASB17Q8WXJ9 295 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 C3orf49Q96BT1 292 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 MIEF2Q96C03 454 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 TMCO6Q96DC7 493 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ZC3HAV1LQ96H79 300 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF160Q9HCG1 818 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 PRTFDC1Q9NRG1 225 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 HRASLS2Q9NWW9 162 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SMPD3Q9NY59 655 aaPredicted RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FKBP7Q9Y680 259 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 TRAV36DV7A0A075B6V5 113 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 AKR7A2O43488 359 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 WBP4O75554 376 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FASP25445 335 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ALDH4A1P30038 563 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ACTR1AP61163 376 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 KCNJ2P63252 427 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 CSTF1Q05048 431 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 CBFBQ13951 182 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 PPA1Q15181 289 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF74Q16587 644 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 NKAIN1Q4KMZ8 207 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 KRTCAP3Q53RY4 240 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FBXO48Q5FWF7 155 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 THEMIS2Q5TEJ8 643 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms