RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 HTR6P50406 440 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FOXA1P55317 472 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 IRF8Q02556 426 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PRDX1Q06830 199 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZFP36L1Q07352 338 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 CUL3Q13618 768 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZNF678Q5SXM1 525 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 HHATQ5VTY9 493 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CLEC6AQ6EIG7 209 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 COLCA1Q6ZS62 124 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PRSS41Q7RTY9 318 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SYVN1Q86TM6 617 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ASPGQ86U10 573 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PAQR7Q86WK9 346 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FGFBP3Q8TAT2 258 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ATL1Q8WXF7 558 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 N4BP2L2Q92802 583 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 TANKQ92844 425 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RFT1Q96AA3 541 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FAM71F1Q96KD3 344 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLX1AQ9BQ83 275 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ACTR8Q9H981 624 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 VIPAS39Q9H9C1 493 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FGF21Q9NSA1 209 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FARSBQ9NSD9 589 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 FAM212BQ9NTI7 297 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 C11orf21Q9P2W6 132 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 DHCR7Q9UBM7 475 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZNF225Q9UK10 706 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 NSG2Q9Y328 171 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SEC16AO15027 2179 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ACACBO00763 2458 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 HEATR5BQ9P2D3 2071 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 IGHV4-28A0A0C4DH34 117 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RPS10-NUDT3A0A1W2PQS6 291 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 C4orf51C9J302 202 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 H0YGG7 62 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 LDB3O75112 727 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 TNFSF15O95150 251 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZBTB11O95625 1053 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 TGFAP01135 160 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 BPGMP07738 259 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 RPS17P08708 135 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 S1PR1P21453 382 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CCNG1P51959 295 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ERVPABLB-1P60509 514 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 GMFBP60983 142 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 HERVK_113P63132 956 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 DLK1P80370 383 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CDKL1Q00532 357 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 MYBPHQ13203 477 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SRSF6Q13247 344 aaKnown RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 ILKQ13418 452 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ARHGAP19Q14CB8 494 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 TGIF1Q15583 401 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLC5A12Q1EHB4 618 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 CFAP157Q5JU67 520 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 AGBL2Q5U5Z8 902 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PWWP2BQ6NUJ5 590 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 FAM199XQ6PEV8 388 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 PRSS42Q7Z5A4 293 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 VN1R4Q7Z5H5 301 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZFAND4Q86XD8 727 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 NUDCD3Q8IVD9 361 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.39□□□□□ -1.87
APAF1-208ENST00000549007 PRSS58Q8IYP2 241 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 C1orf87Q8N0U7 546 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 OR4F6Q8NGB9 312 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 C9orf43Q8TAL5 461 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 PIGTQ969N2 578 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 ERVK-6Q9BXR3 956 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 C20orf27Q9GZN8 174 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 SLC39A1Q9NY26 324 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 NKIRAS1Q9NYS0 192 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 MARCOQ9UEW3 520 aaPredicted RBP3.39□□□□□ -1.87
APAF1-208ENST00000549007 EPHA6Q9UF33 1036 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 BTRCQ9Y297 605 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 AP1M2Q9Y6Q5 423 aa3.39□□□□□ -1.87
APAF1-208ENST00000549007 PCM1Q15154 2024 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 TRABD2BA6NFA1 517 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 DNAJB6O75190 326 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 KIAA0754O94854 1291 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 AKR7A3O95154 331 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 NR1D1P20393 614 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 OR3A1P47881 315 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 SLC9A3P48764 834 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 HNMTP50135 292 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 CCR8P51685 355 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 RAB8AP61006 207 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 EGR4Q05215 589 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 KLF9Q13886 244 aaPredicted RBP3.38□□□□□ -1.87
APAF1-208ENST00000549007 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 CCDC153Q494R4 210 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 ZNF425Q6IV72 752 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 FAM166AQ6J272 317 aa3.38□□□□□ -1.87
APAF1-208ENST00000549007 PRR27Q6MZM9 219 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms