RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 RNF130Q86XS8 419 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 ADGRG3Q86Y34 549 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 MUC15Q8N387 334 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 ZNF525Q8N782 197 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 ANKFN1Q8N957 763 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 SPATA3Q8NHX4 192 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 PNPT1Q8TCS8 783 aaKnown RBP17.9■□□□□ 0.46
SSH1-207ENST00000547862 NEURL3Q96EH8 262 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 DHRS9Q9BPW9 319 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 C20orf27Q9GZN8 174 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 MANSC1Q9H8J5 431 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 MALT1Q9UDY8 824 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 TMED7Q9Y3B3 224 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 CUBNO60494 3623 aa17.9■□□□□ 0.46
SSH1-207ENST00000547862 YLPM1P49750 1951 aaKnown RBP17.9■□□□□ 0.46
SSH1-207ENST00000547862 PRAMEF27A3QJZ7 478 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 A8MV72 311 aaPredicted RBP17.89■□□□□ 0.45
SSH1-207ENST00000547862 E9PBE3 544 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 SCN2BO60939 215 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 S100A3P33764 101 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 CASP8Q14790 479 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 SYPL1Q16563 259 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 SSX8Q7RTT4 187 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 DEPDC4Q8N2C3 294 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 AENQ8WTP8 325 aaKnown RBP17.89■□□□□ 0.45
SSH1-207ENST00000547862 WDR60Q8WVS4 1066 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 TESCQ96BS2 214 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 DDIT4LQ96D03 193 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 RADILQ96JH8 1075 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 ZIM3Q96PE6 472 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 TMEM181Q9P2C4 612 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 RAP2CQ9Y3L5 183 aa17.89■□□□□ 0.45
SSH1-207ENST00000547862 GOLGA8QA0A0J9YX86 632 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 GOLGA8OA6NCC3 632 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 GOLGA8NF8WBI6 632 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 HMGN4O00479 90 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 CHRM4P08173 479 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 LBPP18428 481 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 CDH2P19022 906 aaPredicted RBP17.88■□□□□ 0.45
SSH1-207ENST00000547862 BGNP21810 368 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 TACR3P29371 465 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 SLC1A6P48664 564 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 POLR2HP52434 150 aaKnown RBP17.88■□□□□ 0.45
SSH1-207ENST00000547862 SLC16A1P53985 500 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 CLNS1AP54105 237 aaKnown RBP17.88■□□□□ 0.45
SSH1-207ENST00000547862 SLC25A3Q00325 362 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 RAB35Q15286 201 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 GABRA6Q16445 453 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 CHRFAM7AQ494W8 412 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 HIPK1Q86Z02 1210 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 SORT1Q99523 831 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 GRIP2Q9C0E4 1043 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 SAP130Q9H0E3 1048 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 CENPHQ9H3R5 247 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 EXOSC3Q9NQT5 275 aaKnown RBP17.88■□□□□ 0.45
SSH1-207ENST00000547862 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
SSH1-207ENST00000547862 OSGIN1Q9UJX0 560 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 SLC9A8Q9Y2E8 581 aa17.88■□□□□ 0.45
SSH1-207ENST00000547862 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
SSH1-207ENST00000547862 MXRA5Q9NR99 2828 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 ZC3H12DA2A288 527 aaKnown RBP17.87■□□□□ 0.45
SSH1-207ENST00000547862 RGS16O15492 202 aaPredicted RBP17.87■□□□□ 0.45
SSH1-207ENST00000547862 DNPH1O43598 174 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 IFNA2P01563 188 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 IMPDH2P12268 514 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 RPL14P50914 215 aaKnown RBP17.87■□□□□ 0.45
SSH1-207ENST00000547862 SLC35A1P78382 337 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 TMEM249Q2WGJ8 235 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 C6orf52Q5T4I8 152 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 PODNL1Q6PEZ8 512 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 TEX37Q96LM6 180 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 PANX1Q96RD7 426 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 NAA11Q9BSU3 229 aaPredicted RBP17.87■□□□□ 0.45
SSH1-207ENST00000547862 INPP5KQ9BT40 448 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 SLC38A1Q9H2H9 487 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 SLC7A10Q9NS82 523 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 FLVCR1Q9Y5Y0 555 aa17.87■□□□□ 0.45
SSH1-207ENST00000547862 LY6HO94772 140 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 GSNP06396 782 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 ZNF16P17020 682 aaPredicted RBP17.86■□□□□ 0.45
SSH1-207ENST00000547862 CDKN2CP42773 168 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 HTR3AP46098 478 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 UFM1P61960 85 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 DPY19L1Q2PZI1 675 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 MRPL2Q5T653 305 aaKnown RBP17.86■□□□□ 0.45
SSH1-207ENST00000547862 TSPO2Q5TGU0 170 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 OR7E24Q6IFN5 339 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 KLHL24Q6TFL4 600 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 PHC2Q8IXK0 858 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 OIT3Q8WWZ8 545 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 PAIP2Q9BPZ3 127 aaKnown RBP17.86■□□□□ 0.45
SSH1-207ENST00000547862 PNPOQ9NVS9 261 aa17.86■□□□□ 0.45
SSH1-207ENST00000547862 A0A096LNT2 108 aa17.85■□□□□ 0.45
SSH1-207ENST00000547862 CCDC154A6NI56 674 aa17.85■□□□□ 0.45
SSH1-207ENST00000547862 ATP6V1G2-DDX39BF2Z307 99 aa17.85■□□□□ 0.45
SSH1-207ENST00000547862 ALDOCP09972 364 aaKnown RBP17.85■□□□□ 0.45
SSH1-207ENST00000547862 NR2F1P10589 423 aa17.85■□□□□ 0.45
SSH1-207ENST00000547862 CLK1P49759 484 aaKnown RBP17.85■□□□□ 0.45
SSH1-207ENST00000547862 OR7A5Q15622 319 aa17.85■□□□□ 0.45
SSH1-207ENST00000547862 COX20Q5RI15 118 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms