RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 PAIP1Q9H074 479 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 RAD21L1Q9H4I0 556 aa16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 ESRP2Q9H6T0 727 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 SLCO1B3Q9NPD5 702 aa16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 RLIMQ9NVW2 624 aa16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 PRSS50Q9UI38 385 aa16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 PCDHB14Q9Y5E9 798 aa16.51■□□□□ 0.23
CHMP1A-203ENST00000547614 HS3ST1O14792 307 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 BMP2P12643 396 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 CCNA2P20248 432 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 COX5AP20674 150 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 EDNRAP25101 427 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 OR2B6P58173 313 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 SLC35A1P78382 337 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 IRX1P78414 480 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 FADDQ13158 208 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 LARS2Q15031 903 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 RGNQ15493 299 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 GTDC1Q4AE62 458 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 NCMAPQ5T1S8 102 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 RNF220Q5VTB9 566 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 PRAMEF8Q5VWM4 474 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 PRAMEF7Q5VXH5 474 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 FBXW9Q5XUX1 488 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 P2RY8Q86VZ1 359 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 VRK2Q86Y07 508 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 ARMC7Q9H6L4 198 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 TMEM45AQ9NWC5 275 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 NOSIPQ9Y314 301 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 IFT52Q9Y366 437 aa16.5■□□□□ 0.23
CHMP1A-203ENST00000547614 ZFHX3Q15911 3703 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 A0A096LPI6 279 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 TMEM72A0PK05 275 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 CLIC1O00299 241 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 PGM3O95394 542 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 PLAUP00749 431 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 ACAA2P42765 397 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 TTMPQ5BVD1 217 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 ALKBH2Q6NS38 261 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 BLOC1S3Q6QNY0 202 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 ZNF836Q6ZNA1 936 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 FUNDC1Q8IVP5 155 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 TMEM19Q96HH6 336 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 C18orf12Q96KH6 178 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 NAA11Q9BSU3 229 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 SPATA9Q9BWV2 254 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 GSX2Q9BZM3 304 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 CACYBPQ9HB71 228 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 BCL2L10Q9HD36 194 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 ZNF443Q9Y2A4 671 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 NF1P21359 2839 aa16.49■□□□□ 0.23
CHMP1A-203ENST00000547614 MRPL33O75394 65 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 LYZL6O75951 148 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 GKN3PP0CG01 181 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 IMPDH2P12268 514 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 PAX1P15863 534 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 HOXB9P17482 250 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 IGHV1-2P23083 117 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 CXCR1P25024 350 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 COPZ1P61923 177 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 CAPRIN1Q14444 709 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 Q5PR19 223 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 TIMM23BQ5SRD1 257 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 LRIF1Q5T3J3 769 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 WBP2NLQ6ICG8 309 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 SLC2A7Q6PXP3 512 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 PAQR6Q6TCH4 344 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 SEZ6L2Q6UXD5 910 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 BIVMQ86UB2 503 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 CCDC103Q8IW40 242 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 CLIP4Q8N3C7 705 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 ZNF433Q8N7K0 673 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 GOLGA6L1Q8N7Z2 621 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 DYDC1Q8WWB3 177 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 SLC35B4Q969S0 331 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 APH1AQ96BI3 265 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 MUCL1Q96DR8 90 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 EBF4Q9BQW3 602 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 A4GALTQ9NPC4 353 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 PARPBPQ9NWS1 579 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 GMEB1Q9Y692 573 aa16.48■□□□□ 0.23
CHMP1A-203ENST00000547614 ZC3H12DA2A288 527 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 HMGB1P1B2RPK0 211 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 CD3EP07766 207 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 GGT1P19440 569 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 NTF4P34130 210 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 AQP5P55064 265 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 HDXQ7Z353 690 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 AKAP1Q92667 903 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 SPDL1Q96EA4 605 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 DNAJA3Q96EY1 480 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 CXorf56Q9H5V9 222 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 VIPAS39Q9H9C1 493 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 SLC52A3Q9NQ40 469 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 ZNF701Q9NV72 531 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 INTS9Q9NV88 658 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 MALT1Q9UDY8 824 aa16.47■□□□□ 0.23
CHMP1A-203ENST00000547614 CHST2Q9Y4C5 530 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms