RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 OR52E1Q8NGJ3 308 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 CASTOR1Q8WTX7 329 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 CXorf40BQ96DE9 158 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 FCRL1Q96LA6 429 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PLA2G2FQ9BZM2 168 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SLCO1C1Q9NYB5 712 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 TSPAN11A1L157 253 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 C11orf98E9PRG8 122 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZGLP1P0C6A0 271 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF35P13682 527 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ACHEP22303 614 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PKLRP30613 574 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PUDPQ08623 228 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 HYAL1Q12794 435 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OR1Q1Q15612 314 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 HSD17B12Q53GQ0 312 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 MFSD12Q6NUT3 480 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM64Q6YI46 380 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF836Q6ZNA1 936 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 TRILQ7L0X0 811 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 MEPCEQ7L2J0 689 aaKnown RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF627Q7L945 461 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 HDDC3Q8N4P3 179 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OR6M1Q8NGM8 313 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 APOBEC4Q8WW27 367 aaKnown RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 VOPP1Q96AW1 172 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 MYADMQ96S97 322 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 RPS6KB2Q9UBS0 482 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SOX1O00570 391 aaPredicted RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OR10H2O60403 315 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SHC2P98077 582 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SGCGQ13326 291 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 FAM69AQ5T7M9 428 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 AADACL4Q5VUY2 407 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OR10K2Q6IF99 312 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 C3P1Q6ZMU1 363 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 CAMKMTQ7Z624 323 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZFP82Q8N141 532 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 LSMEM1Q8N8F7 131 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 OR56B4Q8NH76 319 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SYNPRQ8TBG9 265 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ZPLD1Q8TCW7 415 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ELP4Q96EB1 424 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 LIN7BQ9HAP6 207 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 DLL4Q9NR61 685 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 SDHAF2Q9NX18 166 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 APOBEC3BQ9UH17 382 aaKnown RBP13.54□□□□□ -0.24
HOXC11-202ENST00000546378 PLEKHA6Q9Y2H5 1048 aa13.54□□□□□ -0.24
HOXC11-202ENST00000546378 ARHGEF17Q96PE2 2063 aaPredicted RBP13.53□□□□□ -0.24
HOXC11-202ENST00000546378 TOR1AO14656 332 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 STX11O75558 287 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PSMA3P25788 255 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 VITQ6UXI7 678 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 FGF14Q92915 247 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 GDF15Q99988 308 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 ACTR6Q9GZN1 396 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 AICDAQ9GZX7 198 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PTPRSQ13332 1948 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 CBX7O95931 251 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PCSK2P16519 638 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 F8A1P23610 371 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 STAT5AP42229 794 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PCBP4P57723 403 aaKnown RBP13.53□□□□□ -0.24
HOXC11-202ENST00000546378 TNK1Q13470 666 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF234Q14588 700 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 RAB30Q15771 203 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PCGF3Q3KNV8 242 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM81Q6P7N7 255 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 ATRAIDQ6UW56 229 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 DUSP18Q8NEJ0 188 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 OR4D10Q8NGI6 311 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 PPP1R14AQ96A00 147 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 HS6ST2Q96MM7 605 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
HOXC11-202ENST00000546378 ASB6Q9NWX5 421 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
HOXC11-202ENST00000546378 IGKV1-8A0A0C4DH67 115 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 MAN2B1O00754 1011 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 ATP5A1P25705 553 aaKnown RBP13.52□□□□□ -0.24
HOXC11-202ENST00000546378 HTR1FP30939 366 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 BTCP35070 178 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 GAS6Q14393 721 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 NDUFA9Q16795 377 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 PLA1AQ53H76 456 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 STPG1Q5TH74 334 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 NIPAL3Q6P499 406 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 CPA6Q8N4T0 437 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 OR2L2Q8NH16 312 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 C1QTNF7Q9BXJ2 289 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 OR52A5Q9H2C5 316 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM231Q9H6L2 316 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms