RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SLC25A19Q9HC21 320 aa7.3□□□□□ -1.24
UBR1-202ENST00000546274 TVP23BQ9NYZ1 205 aa7.3□□□□□ -1.24
UBR1-202ENST00000546274 KCND3Q9UK17 655 aa7.3□□□□□ -1.24
UBR1-202ENST00000546274 RPL36Q9Y3U8 105 aaKnown RBP7.3□□□□□ -1.24
UBR1-202ENST00000546274 ANHXE9PGG2 379 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TLX2O43763 284 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 GPR37L1O60883 481 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SLC25A12O75746 678 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 APBB3O95704 486 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 RAB3DO95716 219 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CXCL10P02778 98 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 GIPP09681 153 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 NPPBP16860 134 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SHC1P29353 583 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 PRLHRP49683 370 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CCL23P55773 120 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CDK6Q00534 326 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 E2F1Q01094 437 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 HYAL4Q2M3T9 481 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TMEM215Q68D42 235 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 C11orf88Q6PI97 169 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CASP12Q6UXS9 341 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 LHFPL3Q86UP9 236 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FOXRED2Q8IWF2 684 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SLC39A11Q8N1S5 342 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TRAM1L1Q8N609 369 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ZNF480Q8WV37 535 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ACOT12Q8WYK0 555 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 BSCL2Q96G97 398 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 TCF7L1Q9HCS4 588 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CYSLTR2Q9NS75 346 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 MAP4K5Q9Y4K4 846 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 PTPRSQ13332 1948 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ARRDC5A6NEK1 342 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 MBTPS2O43462 519 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CTSLP07711 333 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CPT2P23786 658 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TBPL1P62380 186 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SORDQ00796 357 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SLC9A5Q14940 896 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 RSU1Q15404 277 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 CDNFQ49AH0 187 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FAM71E1Q6IPT2 247 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 MED27Q6P2C8 311 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TMPRSS11BQ86T26 416 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ADIPOR2Q86V24 386 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TMEM25Q86YD3 366 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 IQCF1Q8N6M8 205 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 OR5M3Q8NGP4 307 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 C16orf78Q8WTQ4 265 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 GEMIN6Q8WXD5 167 aaKnown RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 VWCEQ96DN2 955 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ZNF559Q9BR84 538 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 METTL9Q9H1A3 318 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 PRDM13Q9H4Q3 707 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 NMNAT1Q9HAN9 279 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 BARX1Q9HBU1 254 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 MEPEQ9NQ76 525 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 DMRT3Q9NQL9 472 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 KLHL1Q9NR64 748 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 RASL12Q9NYN1 266 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 RASD1Q9Y272 281 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 hCG_1809904A0A1W2PP81 198 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 A0A1W2PR64 198 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 A0A1W2PRV1 198 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 A6NLC8 198 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 H7C1Q1 480 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FOXE1O00358 373 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 GRM6O15303 877 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TGM5O43548 720 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 MPZL2O60487 215 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 C1orf105O95561 183 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FGF19O95750 216 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ARAFP10398 606 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 EPXP11678 715 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 GNSP15586 552 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 HTR2AP28223 471 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 WNT4P56705 351 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 STARD6P59095 220 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 HNRNPKP61978 463 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBR1-202ENST00000546274 PDZD11Q5EBL8 140 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FAAP20Q6NZ36 180 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ANKRD33Q7Z3H0 272 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TECPR1Q7Z6L1 1165 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 UBAC2Q8NBM4 344 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 HIST1H2BAQ96A08 127 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 SLC6A18Q96N87 628 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 GAL3ST4Q96RP7 486 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 C2orf88Q9BSF0 95 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 IFT27Q9BW83 186 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
UBR1-202ENST00000546274 SLC46A2Q9BY10 475 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 MYNNQ9NPC7 610 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 ENPP4Q9Y6X5 453 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 COL4A3Q01955 1670 aa7.29□□□□□ -1.24
UBR1-202ENST00000546274 TRBV4-1A0A0J9YWV2 114 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 A0A1W2PPC1 479 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 A0A1W2PRU2 124 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms