RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 A0A0G2JPF8 293 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 A0A0J9YW62 118 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CENPVL1A0A0U1RR11 272 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 A0A1W2PP18 115 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 TUBAL3A6NHL2 446 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 A8MXE2 369 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 EVPLLA8MZ36 301 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 HNRNPCL2B2RXH8 293 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 HNRNPCL3B7ZW38 293 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 C5orf58C9J3I9 102 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 ETV2O00321 342 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 HNRNPCL1O60812 293 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 TNFSF13O75888 250 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 C1QCP02747 245 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 BCHEP06276 602 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 THBDP07204 575 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CHRM4P08173 479 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 VIMP08670 466 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 TFPTP0C1Z6 253 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 HNRNPCL4P0DMR1 293 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 UQCRBP14927 111 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 IFNGR1P15260 489 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CAPN3P20807 821 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 SLC7A1P30825 629 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 RYKP34925 604 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 APOBEC1P41238 236 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 HTR3AP46098 478 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 MVDP53602 400 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 DLX5P56178 289 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CTBP2P56545 445 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 SESN3P58005 492 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 SORDQ00796 357 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 MERTKQ12866 999 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 IKZF1Q13422 519 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 LARS2Q15031 903 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 RGNQ15493 299 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CTU2Q2VPK5 515 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 GTDC1Q4AE62 458 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 LRIF1Q5T3J3 769 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 C3orf33Q6P1S2 294 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 LUZP2Q86TE4 346 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF440Q8IYI8 595 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 FAM71CQ8NEG0 241 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 ATP6V1C2Q8NEY4 427 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 OR52P1PQ8NH57 321 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 TSPEARQ8WU66 669 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 SLC25A43Q8WUT9 341 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 SLC38A5Q8WUX1 472 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 CPNE4Q96A23 557 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 STARD4Q96DR4 205 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 AURKBQ96GD4 344 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 GMPPAQ96IJ6 420 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 ADGRG7Q96K78 797 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 KLHDC3Q9BQ90 382 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 FANCFQ9NPI8 374 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 ACER3Q9NUN7 267 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 LEF1Q9UJU2 399 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-224ENST00000544990 PROCRQ9UNN8 238 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 IFT52Q9Y366 437 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 NDUFAF1Q9Y375 327 aa6.6□□□□□ -1.35
CPSF7-224ENST00000544990 MYO9AB2RTY4 2548 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 MPDZO75970 2070 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CFAP73A6NFT4 308 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CLDN24A6NM45 220 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 ANGPT2O15123 496 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 EFNA2O43921 213 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 AQP8O94778 261 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 NTN1O95631 604 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CD8BP10966 210 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 IL11P20809 199 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 RPS4Y1P22090 263 aaKnown RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 KCNJ5P48544 419 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 IDH2P48735 452 aaKnown RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 PCYT1AP49585 367 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 ARFIP2P53365 341 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 RAC3P60763 192 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 COPZ1P61923 177 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CSNK2A1P68400 391 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 SIRPAP78324 504 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 RNPS1Q15287 305 aaKnown RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 LIN52Q52LA3 116 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 PAGE3Q5JUK9 113 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 SLC35F1Q5T1Q4 408 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 MRPL2Q5T653 305 aaKnown RBP6.59□□□□□ -1.35
CPSF7-224ENST00000544990 PRAMEF8Q5VWM4 474 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 PRAMEF7Q5VXH5 474 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 VWA1Q6PCB0 445 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 PLEKHM3Q6ZWE6 761 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 ZNF550Q7Z398 422 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 GRINAQ7Z429 371 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 HMGN2P46Q86SG4 172 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 SLC43A2Q8N370 569 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 OR6K3Q8NGY3 331 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 BBS10Q8TAM1 723 aa6.59□□□□□ -1.35
CPSF7-224ENST00000544990 FAM222BQ8WU58 562 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms