RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 FUZQ9BT04 418 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 RTN4RQ9BZR6 473 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 COQ10BQ9H8M1 238 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MAN2C1Q9NTJ4 1040 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MED17Q9NVC6 651 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 QPCTLQ9NXS2 382 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 VNN3Q9NY84 501 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 PLA2G3Q9NZ20 509 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MED11Q9P086 117 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 RHCGQ9UBD6 479 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 DKKL1Q9UK85 242 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 POFUT2Q9Y2G5 429 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
YBX3-215ENST00000544504 MED13Q9UHV7 2174 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 A0A087WUU8 490 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 TMED7-TICAM2A0A0A6YYA0 188 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 TRBV4-1A0A0J9YWV2 114 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ACOT7O00154 380 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 EI24O14681 340 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 GNB5O14775 395 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ADAM11O75078 769 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ALPLP05186 524 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ZNF26P17031 533 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 PRKCAP17252 672 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 IGFBP5P24593 272 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ELK4P28324 431 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 TACR3P29371 465 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 DNASE1L1P49184 302 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 IST1P53990 364 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 CTBP2P56545 445 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PPP2R2BQ00005 443 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PLGLB1Q02325 96 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 HYAL4Q2M3T9 481 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PLPPR5Q32ZL2 321 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ANKDD1AQ495B1 522 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 OR5M10Q6IEU7 315 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 FAHD1Q6P587 224 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 CD300LDQ6UXZ3 194 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ATG4DQ86TL0 474 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 SLC22A16Q86VW1 577 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 EPHX4Q8IUS5 362 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 SLC43A2Q8N370 569 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 WDSUB1Q8N9V3 476 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 AQP11Q8NBQ7 271 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 OR6S1Q8NH40 331 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 MAGEE2Q8TD90 523 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 STK35Q8TDR2 534 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 NRG4Q8WWG1 115 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 DDIT4LQ96D03 193 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 SIGLEC12Q96PQ1 595 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 FEVQ99581 238 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ZNF184Q99676 751 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 PRSS27Q9BQR3 290 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 ZNF426Q9BUY5 554 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 DGCR6LQ9BY27 220 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 NDEL1Q9GZM8 345 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 Q9H521 79 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PROK2Q9HC23 129 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 PAPOLBQ9NRJ5 636 aaKnown RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 KRT84Q9NSB2 600 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 SMPD3Q9NY59 655 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 TUBA8Q9NY65 449 aaPredicted RBP8.62□□□□□ -1.03
YBX3-215ENST00000544504 OSGIN1Q9UJX0 560 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 NTNG1Q9Y2I2 539 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 C15orf41Q9Y2V0 281 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 TMED7Q9Y3B3 224 aa8.62□□□□□ -1.03
YBX3-215ENST00000544504 F8P00451 2351 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 C2orf72A6NCS6 295 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 GJE1A6NN92 205 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 A8MVM7 634 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PDLIM1O00151 329 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 SOCS2O14508 198 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 ZNF208O43345 1280 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 OR2T1O43869 369 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 LYPD3O95274 346 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 AHSA1O95433 338 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 NTN1O95631 604 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PRF1P14222 555 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 HK1P19367 917 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 CBLP22681 906 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 FPR3P25089 353 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 GDF1P27539 372 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 RPS6KA3P51812 740 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 ESRRGP62508 458 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PRKCDQ05655 676 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PPP1R8Q12972 351 aaKnown RBP8.61□□□□□ -1.03
YBX3-215ENST00000544504 TSPAN31Q12999 210 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 SELENBP1Q13228 472 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 MFSD13AQ14CX5 517 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TOMM20Q15388 145 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 INAQ16352 499 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 NADK2Q4G0N4 442 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 WLSQ5T9L3 541 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 KDM4DQ6B0I6 523 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 ZNF770Q6IQ21 691 aaPredicted RBP8.61□□□□□ -1.03
YBX3-215ENST00000544504 RPL13AP3Q6NVV1 102 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms