RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ETV2O00321 342 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 KPNA4O00629 521 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 CHP2O43745 196 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 EFNA2O43921 213 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 OR5F1O95221 314 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 GPIP06744 558 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 TMIGD3P0DMS9 266 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 GLI4P10075 376 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 UMPSP11172 480 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ATP6V1B2P21281 511 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 FPR1P21462 350 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 CBLP22681 906 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 SHC1P29353 583 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 RPS5P46782 204 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 CLK1P49759 484 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 DIO1P49895 249 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ERFP50548 548 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 CTBP2P56545 445 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 SIRPAP78324 504 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 SLC35A1P78382 337 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 SPIBQ01892 262 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 CHRNB3Q05901 458 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 GABPB1Q06547 395 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 ST3GAL3Q11203 375 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 GTF3C1Q12789 2109 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 TRAP1Q12931 704 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 MYBPHQ13203 477 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 OR7A5Q15622 319 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 NPTX1Q15818 432 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 HSPB2Q16082 182 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 FAM98BQ52LJ0 330 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 SWT1Q5T5J6 900 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 C1orf146Q5VVC0 180 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 C1orf140Q5VVS0 124 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 OR2A2Q6IF42 318 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 C5orf46Q6UWT4 87 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 TMPPEQ6ZT21 453 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 GDF7Q7Z4P5 450 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 MRGPRGQ86SM5 289 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ATG4DQ86TL0 474 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 ZGRF1Q86YA3 2104 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 P3H2Q8IVL5 708 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ZDHHC21Q8IVQ6 265 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 RPRMLQ8N4K4 120 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 FAM26EQ8N5C1 309 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 CNEP1R1Q8N9A8 125 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 FNDC9Q8TBE3 224 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 STK35Q8TDR2 534 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 CA5BP1Q8WTZ4 195 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 WNT2BQ93097 391 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 POP5Q969H6 163 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 SDCCAG3Q96C92 435 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 CCDC120Q96HB5 630 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 PRRC1Q96M27 445 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 RSPO3Q9BXY4 272 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 CADM1Q9BY67 442 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 POLR2J2Q9GZM3 115 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 POLR2J3Q9H1A7 115 aaKnown RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 LRMDAQ9H2I8 198 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 MMADHCQ9H3L0 296 aaPredicted RBP5.67□□□□□ -1.5
LTBR-212ENST00000543542 C12orf10Q9HB07 376 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 RIMS3Q9UJD0 308 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 AURKCQ9UQB9 309 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 FAM215AQ9Y5M1 114 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 ZNF407Q9C0G0 2248 aa5.67□□□□□ -1.5
LTBR-212ENST00000543542 SMG1Q96Q15 3661 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 KIAA1549Q9HCM3 1950 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SVILO95425 2214 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZFYVE26Q68DK2 2539 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TRAV36DV7A0A075B6V5 113 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 A0A087WUJ7 227 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZC3H12DA2A288 527 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 CD8B2A6NJW9 211 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 FAM90A27PA6NNH2 459 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 KDM4EB2RXH2 506 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 J3KTA2 159 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 GNGT2O14610 69 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 DVL2O14641 736 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ADAMDEC1O15204 470 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 OR2T1O43869 369 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 EIF1BO60739 113 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZG16O60844 167 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SEMA7AO75326 666 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 DIRAS1O95057 198 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 OR6A2O95222 327 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 PMS2P2O95744 297 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TGM6O95932 706 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 HIST1H2ABP04908 130 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 THRBP10828 461 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 NQO1P15559 274 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 BMP5P22003 454 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 AGFG1P52594 562 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 DLX5P56178 289 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SMIM11AP58511 58 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 RAC3P60763 192 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 MS4A2Q01362 244 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms