RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 SUV39H1O43463 412 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 UBCP0CG48 685 aaKnown RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 ADH6P28332 368 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 SLC6A12P48065 614 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 HCCSP53701 268 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 UBE2MP61081 183 aaKnown RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 RPS13P62277 151 aaKnown RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 MC1RQ01726 317 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 GLO1Q04760 184 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 KCNAB1Q14722 419 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 DHCR24Q15392 516 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 MPPED2Q15777 294 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 PLK5Q496M5 336 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 TMEM255AQ5JRV8 349 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 CASP12Q6UXS9 341 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 TMEM200AQ86VY9 491 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 SLC30A8Q8IWU4 369 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 MRPL43Q8N983 215 aaKnown RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 ZNF740Q8NDX6 193 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 PROKR2Q8NFJ6 384 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 OR52E4Q8NGH9 312 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 OR5AK3PQ8NH89 298 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 ACOT12Q8WYK0 555 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 BADQ92934 168 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 GLYATL1Q969I3 302 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 NEIL2Q969S2 332 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 ISOC2Q96AB3 205 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 CNTNAP3BQ96NU0 1288 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 PKP4Q99569 1192 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 EPYCQ99645 322 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 CPPED1Q9BRF8 314 aaPredicted RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 RPS10P5Q9NQ39 176 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 MEPEQ9NQ76 525 aaPredicted RBP10.47□□□□□ -0.73
CDH4-201ENST00000543233 SAGE1Q9NXZ1 904 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 PIPOXQ9P0Z9 390 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 TP53TG5Q9Y2B4 290 aa10.47□□□□□ -0.73
CDH4-201ENST00000543233 MGAT4DA6NG13 374 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 STATHP02808 62 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 CATP04040 527 aaKnown RBP10.46□□□□□ -0.73
CDH4-201ENST00000543233 WNT1P04628 370 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 CLUP10909 449 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 CALCRP30988 508 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 CHI3L1P36222 383 aaPredicted RBP10.46□□□□□ -0.73
CDH4-201ENST00000543233 STARD6P59095 220 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 SORDQ00796 357 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 ARHGAP40Q5TG30 622 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 TCEANCQ8N8B7 351 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 AQP11Q8NBQ7 271 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 GNPDA2Q8TDQ7 276 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.73
CDH4-201ENST00000543233 KCNE1BA0A087WTH5 132 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 GRXCR1A8MXD5 290 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 PRRT4C9JH25 899 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 SMAD9O15198 467 aaKnown RBP10.46□□□□□ -0.74
CDH4-201ENST00000543233 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.74
CDH4-201ENST00000543233 FGBP02675 491 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 HIST1H2ABP04908 130 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 NOS3P29474 1203 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 GPR1P46091 355 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 TNFRSF9Q07011 255 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 NDUFAF6Q330K2 333 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 SPNS3Q6ZMD2 512 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 HIST3H2AQ7L7L0 130 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 TAF8Q7Z7C8 310 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 LRRC18Q8N456 261 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 HUS1BQ8NHY5 278 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 PAQR8Q8TEZ7 354 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 CLP1Q92989 425 aaKnown RBP10.46□□□□□ -0.74
CDH4-201ENST00000543233 HIST1H2ACQ93077 130 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 CMTM7Q96FZ5 175 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 LRFN5Q96NI6 719 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 OR1F2PQ96R84 312 aa10.46□□□□□ -0.74
CDH4-201ENST00000543233 TRIOO75962 3097 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 IGLV3-16A0A075B6K0 115 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 OTOL1A6NHN0 477 aaPredicted RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 GFYI3L273 518 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 MPZL2O60487 215 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 SLC25A12O75746 678 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 PRPS2P11908 318 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 CELP19835 753 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 IMPA1P29218 277 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 OMPP47874 163 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 ATXN7L3Q14CW9 347 aaPredicted RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 ZNF805Q5CZA5 627 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 PLEKHS1Q5SXH7 462 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 ARMC6Q6NXE6 501 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.45□□□□□ -0.74
CDH4-201ENST00000543233 OR5M1Q8NGP8 315 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 MRGPRX3Q96LB0 322 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 ZNF75AQ96N20 296 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 PRDM13Q9H4Q3 707 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 TMEM138Q9NPI0 162 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 RASL12Q9NYN1 266 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 GDE1Q9NZC3 331 aa10.45□□□□□ -0.74
CDH4-201ENST00000543233 RHCGQ9UBD6 479 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms