RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 KLHL28Q9NXS3 571 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLAMF8Q9P0V8 285 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 KLHL13Q9P2N7 655 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CHRNA9Q9UGM1 479 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TRIM33Q9UPN9 1127 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TRAPPC4Q9Y296 219 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GPR52Q9Y2T5 361 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IFT52Q9Y366 437 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HDGFL3Q9Y3E1 203 aa8.67□□□□□ -1.02
TNFRSF1A-214ENST00000543048 F8P00451 2351 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DSPPQ9NZW4 1301 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMED7-TICAM2A0A0A6YYA0 188 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IGHV3-15A0A0B4J1V0 119 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CDHR4A6H8M9 788 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EVPLLA8MZ36 301 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C5orf58C9J3I9 102 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AP3D1O14617 1153 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF208O43345 1280 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ADAM11O75078 769 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PMS2P2O95744 297 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HRGP04196 525 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BCHEP06276 602 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 THBS1P07996 1170 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HOXB9P17482 250 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CCNA2P20248 432 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DNASE1P24855 282 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MAP2K6P52564 334 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ARFIP2P53365 341 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IST1P53990 364 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RELBQ01201 579 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PLAURQ03405 335 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SF3A3Q12874 501 aaKnown RBP eCLIP8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EPS8Q12929 822 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TESK1Q15569 626 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 LIN52Q52LA3 116 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF311Q5JNZ3 666 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PAGE3Q5JUK9 113 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 METTL21CQ5VZV1 264 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 STAC2Q6ZMT1 411 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF550Q7Z398 422 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NUFIP2Q7Z417 695 aaKnown RBP8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MSRB3Q8IXL7 192 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLIP4Q8N3C7 705 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZHX1-C8orf76Q96EF9 292 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM19Q96HH6 336 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SPATA9Q9BWV2 254 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 LIME1Q9H400 295 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PLEKHF2Q9H8W4 249 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BCO1Q9HAY6 547 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A4GALTQ9NPC4 353 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RLIMQ9NVW2 624 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC25A37Q9NYZ2 338 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 KLHL9Q9P2J3 617 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ST6GALNAC2Q9UJ37 374 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OSGIN1Q9UJX0 560 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMED7Q9Y3B3 224 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GMEB1Q9Y692 573 aa8.66□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CADP27708 2225 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM72A0PK05 275 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF724A8MTY0 619 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SMAD9O15198 467 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DNPH1O43598 174 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 LILRA1O75019 489 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PGM3O95394 542 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FESP07332 822 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GKN3PP0CG01 181 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CD1EP15812 388 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GPX2P18283 190 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CRYGSP22914 178 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CXCR1P25024 350 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TACR3P29371 465 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ACAA2P42765 397 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ART1P52961 327 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR2B6P58173 313 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 COPZ1P61923 177 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PDK3Q15120 406 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RUNDC3AQ59EK9 446 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RPS26P11Q5JNZ5 115 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GCNT6Q5T4J0 391 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RNF220Q5VTB9 566 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 WBP2NLQ6ICG8 309 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DLEU7Q6UYE1 221 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF836Q6ZNA1 936 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BBS10Q8TAM1 723 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TSPEARQ8WU66 669 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MAL2Q969L2 176 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DDIT4LQ96D03 193 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZC3HAV1LQ96H79 300 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ARL5BQ96KC2 179 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FOXC2Q99958 501 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PSD2Q9BQI7 771 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NAA11Q9BSU3 229 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 POTEKPQ9BYX7 375 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR10A4Q9H209 315 aa8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CCM2LQ9NUG4 571 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-214ENST00000543048 VAPAQ9P0L0 249 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms