RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TRAM2Q15035 370 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 IGFBP7Q16270 282 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 SGCBQ16585 318 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 EIF2S3LQ2VIR3 472 aaKnown RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 CTU2Q2VPK5 515 aaKnown RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 EMC4Q5J8M3 183 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 DCST1Q5T197 706 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 C1orf185Q5T7R7 199 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 EEF1A1P5Q5VTE0 462 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 NSUN5P2Q63ZY6 315 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 HBMQ6B0K9 141 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 GTF2IRD2BQ6EKJ0 949 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ZNF585AQ6P3V2 769 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 TTC33Q6PID6 262 aaPredicted RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 POMZP3Q6PJE2 187 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 GDF7Q7Z4P5 450 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ADGRE4PQ86SQ3 457 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 GTF2IRD2Q86UP8 949 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ZDHHC21Q8IVQ6 265 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 PIK3C3Q8NEB9 887 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ATP6V1C2Q8NEY4 427 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 SMPDL3BQ92485 455 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 OSTF1Q92882 214 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 WNT2BQ93097 391 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ZFP3Q96NJ6 502 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 NPAS1Q99742 590 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 ZNF426Q9BUY5 554 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 KLHL4Q9C0H6 718 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 RALYQ9UKM9 306 aaKnown RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 MCTS1Q9ULC4 181 aaKnown RBP10.95□□□□□ -0.66
DDX55-210ENST00000543016 OSGIN2Q9Y236 505 aa10.95□□□□□ -0.66
DDX55-210ENST00000543016 MED12Q93074 2177 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TRAV36DV7A0A075B6V5 113 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TRGV8A0A0C4DH27 118 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 A0A0J9YW62 118 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 A0A1W2PRQ8 180 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SULT2B1O00204 365 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SEC14L5O43304 696 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 LYPD3O95274 346 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 AHSA1O95433 338 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SYNGR4O95473 234 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 H1F0P07305 194 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 GNLYP22749 145 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 IDUAP35475 653 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TIMP3P35625 211 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 EIF1AXP47813 144 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 SUCLG1P53597 346 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 CLDN15P56746 228 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 VLDLRP98155 873 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 MYBPHQ13203 477 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 MRPL49Q13405 166 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 DGCR6Q14129 220 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 C3AR1Q16581 482 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 ACSF3Q4G176 576 aaPredicted RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 IQCCQ4KMZ1 466 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 C1orf140Q5VVS0 124 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 OR2A2Q6IF42 318 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 UBQLNLQ8IYU4 475 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 ADGRG5Q8IZF4 528 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SLC43A2Q8N370 569 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 PAPD5Q8NDF8 572 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 OR5M9Q8NGP3 310 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 OR10D3Q8NH80 312 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 MFSD8Q8NHS3 518 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 RNF217Q8TC41 542 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 UTP4Q969X6 686 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 DHRS1Q96LJ7 313 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 OR5B2Q96R09 309 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SEPHS2Q99611 448 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TUBA1CQ9BQE3 449 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TAPBPLQ9BX59 468 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 TMEM185BQ9H7F4 350 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 NMNAT1Q9HAN9 279 aaPredicted RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 GP6Q9HCN6 339 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 GLRX2Q9NS18 164 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
DDX55-210ENST00000543016 ALKBH4Q9NXW9 302 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 SLC7A7Q9UM01 511 aa10.94□□□□□ -0.66
DDX55-210ENST00000543016 KALRNO60229 2985 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 CLCA1A8K7I4 914 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 J3QKU1 62 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 TNFSF11O14788 317 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 FFAR1O14842 300 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 FZD7O75084 574 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 SEMA7AO75326 666 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 PRSS23O95084 383 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 MT-ATP6P00846 226 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 CRHP06850 196 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 NQO1P15559 274 aaKnown RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 CCNA2P20248 432 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 DIO1P49895 249 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 AGFG1P52594 562 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms