RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 AENQ8WTP8 325 aaKnown RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 NPRL2Q8WTW4 380 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 PIGCQ92535 297 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 RASD2Q96D21 266 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ART5Q96L15 291 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 C12orf66Q96MD2 445 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 TRIM51Q9BSJ1 452 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 IQCGQ9H095 443 aaKnown RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 MAGT1Q9H0U3 335 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 NCOR1P1Q9H4R4 102 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 POLE4Q9NR33 117 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 NANSQ9NR45 359 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 RAB20Q9NX57 234 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 ELOVL2Q9NXB9 296 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 HOXC10Q9NYD6 342 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-217ENST00000541578 PLXNB2O15031 1838 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 LTBP2Q14767 1821 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 COL4A1P02462 1669 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 MAST2Q6P0Q8 1798 aa3.46□□□□□ -1.86
SNHG1-217ENST00000541578 DOCK2Q92608 1830 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 IGKV3D-15A0A087WSY6 115 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 A0A1B0GVL5 298 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 LRRIQ4A6NIV6 560 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ARHGEF33A8MVX0 844 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-217ENST00000541578 BTN3A3O00478 584 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 OR7A17O14581 309 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TM9SF1O15321 606 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 MSH4O15457 936 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 FCMRO60667 390 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 IGF1P05019 195 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SFTPCP11686 197 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TNNI1P19237 187 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 IMPDH1P20839 514 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 RPL13AP40429 203 aaKnown RBP3.45□□□□□ -1.86
SNHG1-217ENST00000541578 BDKRB1P46663 353 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 GYG1P46976 350 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ATP5OP48047 213 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 FNTAP49354 379 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 CCT3P49368 545 aaKnown RBP3.45□□□□□ -1.86
SNHG1-217ENST00000541578 IRX1P78414 480 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF85Q03923 595 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TMED1Q13445 227 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 PEX6Q13608 980 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 CRMP1Q14194 572 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 BEND3Q5T5X7 828 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ARMC12Q5T9G4 340 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 FAM219BQ5XKK7 198 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TPGS2Q68CL5 300 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ARMCX5Q6P1M9 558 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 VITQ6UXI7 678 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TMUB2Q71RG4 321 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 CARM1Q86X55 608 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 CCDC65Q8IXS2 484 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SLC35F2Q8IXU6 374 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 MCOLN2Q8IZK6 566 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 CLEC4FQ8N1N0 589 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 BPIFB2Q8N4F0 458 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SPEM1Q8N4L4 309 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF485Q8NCK3 441 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 OR4D5Q8NGN0 318 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 M1APQ8TC57 530 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 C17orf50Q8WW18 174 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TRUB1Q8WWH5 349 aaKnown RBP3.45□□□□□ -1.86
SNHG1-217ENST00000541578 FAM3CQ92520 227 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 NT5C3BQ969T7 300 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 C11orf52Q96A22 123 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 NABP1Q96AH0 204 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 COQ2Q96H96 371 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SLC45A3Q96JT2 553 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 OR5B2Q96R09 309 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SLC6A7Q99884 636 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ATF6BQ99941 703 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ST6GALNAC5Q9BVH7 336 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 OCR1Q9BZK8 76 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 MCCC2Q9HCC0 563 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 TIGARQ9NQ88 270 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 SLC17A5Q9NRA2 495 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 BARHL2Q9NY43 387 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 NUDT4Q9NZJ9 180 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 OARD1Q9Y530 152 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 GBF1Q92538 1859 aa3.45□□□□□ -1.86
SNHG1-217ENST00000541578 ZBED9Q6R2W3 1325 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 A0A075B6Q4 140 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 BTBD17A6NE02 478 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 MPTX1A8MV57 137 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 A8MXK9 166 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 G3V4G9 280 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 LRRTM2O43300 516 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 IDH3BO43837 385 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 TIMM8AO60220 97 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ECI2O75521 394 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 RHBDL1O75783 438 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 AGTP01019 485 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 IGKV5-2P06315 115 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 ALPIP09923 528 aa3.44□□□□□ -1.86
SNHG1-217ENST00000541578 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms