RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ELOVL5Q9NYP7 299 aa15.04■□□□□ -0
CD9-209ENST00000540891 ABCA12Q86UK0 2595 aa15.03■□□□□ -0
CD9-209ENST00000540891 FAM221AA4D161 298 aa15.03■□□□□ -0
CD9-209ENST00000540891 SNX3O60493 162 aa15.03■□□□□ -0
CD9-209ENST00000540891 CCDC22O60826 627 aa15.03■□□□□ -0
CD9-209ENST00000540891 NPPAP01160 153 aa15.03■□□□□ -0
CD9-209ENST00000540891 OPN1SWP03999 348 aa15.03■□□□□ -0
CD9-209ENST00000540891 PCGF2P35227 344 aa15.03■□□□□ -0
CD9-209ENST00000540891 MAP2K6P52564 334 aa15.03■□□□□ -0
CD9-209ENST00000540891 CRYBA2P53672 197 aa15.03■□□□□ -0
CD9-209ENST00000540891 COPZ1P61923 177 aa15.03■□□□□ -0
CD9-209ENST00000540891 BNIP2Q12982 314 aa15.03■□□□□ -0
CD9-209ENST00000540891 ATG4DQ86TL0 474 aaPredicted RBP15.03■□□□□ -0
CD9-209ENST00000540891 MTDHQ86UE4 582 aaKnown RBP15.03■□□□□ -0
CD9-209ENST00000540891 ARMC8Q8IUR7 673 aa15.03■□□□□ -0
CD9-209ENST00000540891 SMYD1Q8NB12 490 aa15.03■□□□□ -0
CD9-209ENST00000540891 GPR32P1Q8NGA4 272 aa15.03■□□□□ -0
CD9-209ENST00000540891 RP9Q8TA86 221 aaKnown RBP15.03■□□□□ -0
CD9-209ENST00000540891 DDIT4LQ96D03 193 aa15.03■□□□□ -0
CD9-209ENST00000540891 RCN3Q96D15 328 aa15.03■□□□□ -0
CD9-209ENST00000540891 ZNF300Q96RE9 604 aaPredicted RBP15.03■□□□□ -0
CD9-209ENST00000540891 ZNF607Q96SK3 696 aa15.03■□□□□ -0
CD9-209ENST00000540891 PRR14Q9BWN1 585 aa15.03■□□□□ -0
CD9-209ENST00000540891 FAM107BQ9H098 131 aa15.03■□□□□ -0
CD9-209ENST00000540891 MYLK2Q9H1R3 596 aa15.03■□□□□ -0
CD9-209ENST00000540891 PIF1Q9H611 641 aa15.03■□□□□ -0
CD9-209ENST00000540891 TMEM181Q9P2C4 612 aa15.03■□□□□ -0
CD9-209ENST00000540891 KLHL9Q9P2J3 617 aa15.03■□□□□ -0
CD9-209ENST00000540891 USP22Q9UPT9 525 aa15.03■□□□□ -0
CD9-209ENST00000540891 TRAPPC4Q9Y296 219 aa15.03■□□□□ -0
CD9-209ENST00000540891 CSMD2Q7Z408 3487 aa15.02■□□□□ -0
CD9-209ENST00000540891 GMNCA6NCL1 334 aa15.02■□□□□ -0
CD9-209ENST00000540891 PRORSD1PA6NEY8 169 aa15.02■□□□□ -0
CD9-209ENST00000540891 ZNF716A6NP11 495 aa15.02■□□□□ -0
CD9-209ENST00000540891 TMEM229AB2RXF0 380 aa15.02■□□□□ -0
CD9-209ENST00000540891 M0QX08 132 aa15.02■□□□□ -0
CD9-209ENST00000540891 DNPH1O43598 174 aa15.02■□□□□ -0
CD9-209ENST00000540891 TPST2O60704 377 aa15.02■□□□□ -0
CD9-209ENST00000540891 RAMP1O60894 148 aa15.02■□□□□ -0
CD9-209ENST00000540891 NPIPB7O75200 414 aa15.02■□□□□ -0
CD9-209ENST00000540891 SERPINB7O75635 380 aa15.02■□□□□ -0
CD9-209ENST00000540891 CTAG2O75638 210 aa15.02■□□□□ -0
CD9-209ENST00000540891 YES1P07947 543 aa15.02■□□□□ -0
CD9-209ENST00000540891 EPXP11678 715 aa15.02■□□□□ -0
CD9-209ENST00000540891 COX4I1P13073 169 aa15.02■□□□□ -0
CD9-209ENST00000540891 POU2F1P14859 743 aa15.02■□□□□ -0
CD9-209ENST00000540891 CXCR1P25024 350 aa15.02■□□□□ -0
CD9-209ENST00000540891 UGT2B10P36537 528 aa15.02■□□□□ -0
CD9-209ENST00000540891 GNGT1P63211 74 aa15.02■□□□□ -0
CD9-209ENST00000540891 H3F3AP84243 136 aa15.02■□□□□ -0
CD9-209ENST00000540891 RASGEF1BQ0VAM2 473 aa15.02■□□□□ -0
CD9-209ENST00000540891 DAZAP2Q15038 168 aaPredicted RBP15.02■□□□□ -0
CD9-209ENST00000540891 DUSP7Q16829 419 aa15.02■□□□□ -0
CD9-209ENST00000540891 VMACQ2NL98 169 aa15.02■□□□□ -0
CD9-209ENST00000540891 TMEM201Q5SNT2 666 aa15.02■□□□□ -0
CD9-209ENST00000540891 TFAP2EQ6VUC0 442 aa15.02■□□□□ -0
CD9-209ENST00000540891 LSMEM1Q8N8F7 131 aa15.02■□□□□ -0
CD9-209ENST00000540891 PCYOX1LQ8NBM8 494 aa15.02■□□□□ -0
CD9-209ENST00000540891 ZNF583Q96ND8 569 aa15.02■□□□□ -0
CD9-209ENST00000540891 SH3GL1Q99961 368 aa15.02■□□□□ -0
CD9-209ENST00000540891 POTEKPQ9BYX7 375 aa15.02■□□□□ -0
CD9-209ENST00000540891 TESMINQ9Y4I5 508 aa15.02■□□□□ -0
CD9-209ENST00000540891 CSMD1Q96PZ7 3565 aa15.02□□□□□ -0.01
CD9-209ENST00000540891 ANKHD1Q8IWZ3 2542 aaKnown RBP15.02□□□□□ -0.01
CD9-209ENST00000540891 FPR1P21462 350 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 EDNRAP25101 427 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 OR2B6P58173 313 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 EXOC3L2Q2M3D2 409 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 C6orf89Q6UWU4 347 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 C22orf34Q6ZV56 151 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 CCDC103Q8IW40 242 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 SLC30A8Q8IWU4 369 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 ZNF775Q96BV0 537 aaPredicted RBP15.01□□□□□ -0.01
CD9-209ENST00000540891 TAMM41Q96BW9 452 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 ARHGDIGQ99819 225 aa15.01□□□□□ -0.01
CD9-209ENST00000540891 GPATCH1Q9BRR8 931 aaKnown RBP15.01□□□□□ -0.01
CD9-209ENST00000540891 IGKV3D-15A0A087WSY6 115 aa15□□□□□ -0.01
CD9-209ENST00000540891 A0A1B0GWA3 101 aa15□□□□□ -0.01
CD9-209ENST00000540891 SH3D21A4FU49 640 aa15□□□□□ -0.01
CD9-209ENST00000540891 LIPT2A6NK58 231 aa15□□□□□ -0.01
CD9-209ENST00000540891 A6NNC1 897 aa15□□□□□ -0.01
CD9-209ENST00000540891 ZNF724A8MTY0 619 aa15□□□□□ -0.01
CD9-209ENST00000540891 A8MVM7 634 aa15□□□□□ -0.01
CD9-209ENST00000540891 M0R3H8 397 aa15□□□□□ -0.01
CD9-209ENST00000540891 LGI1O95970 557 aa15□□□□□ -0.01
CD9-209ENST00000540891 CD247P20963 164 aa15□□□□□ -0.01
CD9-209ENST00000540891 IDUAP35475 653 aa15□□□□□ -0.01
CD9-209ENST00000540891 KCNJ5P48544 419 aa15□□□□□ -0.01
CD9-209ENST00000540891 RGS8P57771 180 aaPredicted RBP15□□□□□ -0.01
CD9-209ENST00000540891 EGR4Q05215 589 aa15□□□□□ -0.01
CD9-209ENST00000540891 PDK3Q15120 406 aa15□□□□□ -0.01
CD9-209ENST00000540891 STAC2Q6ZMT1 411 aa15□□□□□ -0.01
CD9-209ENST00000540891 CCDC80Q76M96 950 aa15□□□□□ -0.01
CD9-209ENST00000540891 BHLHE22Q8NFJ8 381 aaPredicted RBP15□□□□□ -0.01
CD9-209ENST00000540891 OR52E4Q8NGH9 312 aa15□□□□□ -0.01
CD9-209ENST00000540891 ZHX1-C8orf76Q96EF9 292 aa15□□□□□ -0.01
CD9-209ENST00000540891 DACH2Q96NX9 599 aa15□□□□□ -0.01
CD9-209ENST00000540891 WFIKKN1Q96NZ8 548 aa15□□□□□ -0.01
CD9-209ENST00000540891 ECSITQ9BQ95 431 aa15□□□□□ -0.01
CD9-209ENST00000540891 TACO1Q9BSH4 297 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms