RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TEX47	Q8TBZ9	253 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KCNE4	Q8WWG9	221 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GIMAP1	Q8WWP7	306 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ST8SIA2	Q92186	375 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ST8SIA4	Q92187	359 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SCMH1	Q96GD3	660 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF354B	Q96LW1	612 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FER1L6-AS2	Q96M78	137 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	F2RL3	Q96RI0	385 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ORAI3	Q9BRQ5	295 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ULBP3	Q9BZM4	244 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MCCC2	Q9HCC0	563 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DMRT3	Q9NQL9	472 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MAN2C1	Q9NTJ4	1040 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HCN3	Q9P1Z3	774 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DOCK8	Q8NF50	2099 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TCRBV16S1A1N1	A0A5B0	115 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DCDC2B	A2VCK2	349 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARRDC5	A6NEK1	342 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CPSF4L	A6NMK7	179 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		B4E171	279 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		H7BY64	318 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		M0R233	179 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ERI3	O43414	337 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HYAL3	O43820	417 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRKRA	O75569	313 aa	Known RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ACSM4	P0C7M7	580 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HPGD	P15428	266 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TSPAN7	P41732	249 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GPR4	P46093	362 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PITPNB	P48739	271 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RNF144A	P50876	292 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC16A1	P53985	500 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BTG1	P62324	171 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CDK5	Q00535	292 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HSF2	Q03933	536 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GNA13	Q14344	377 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	COL28A1	Q2UY09	1125 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	VASN	Q6EMK4	673 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC27A4	Q6P1M0	643 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SMARCD3	Q6STE5	483 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	METAP1D	Q6UB28	335 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TOMM5	Q8N4H5	51 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SUMF1	Q8NBK3	374 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR2I1P	Q8NGU4	316 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MVB12A	Q96EY5	273 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MMAB	Q96EY8	250 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SCARF2	Q96GP6	870 aa	Predicted RBP	5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CCDC74B	Q96LY2	380 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PRAP1	Q96NZ9	151 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DDO	Q99489	341 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DPAGT1	Q9H3H5	408 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	EMC7	Q9NPA0	242 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TMEM74B	Q9NUR3	256 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	C2orf42	Q9NWW7	574 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ADAM30	Q9UKF2	790 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	POMT2	Q9UKY4	750 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CHST2	Q9Y4C5	530 aa		5.24	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		A0A087WUU8	490 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	XIRP2	A4UGR9	3374 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783		E9PI62	339 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	STMND1	H3BQB6	276 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PPM1D	O15297	605 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	BRINP1	O60477	761 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CLEC3A	O75596	197 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SOX30	O94993	753 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ALDOB	P05062	364 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RRAS	P10301	218 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARHGDIB	P52566	201 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PCBP4	P57723	403 aa	Known RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TSPAN5	P62079	268 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DCD	P81605	110 aa	Known RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PDE7A	Q13946	482 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SERTAD2	Q14140	314 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ELOA	Q14241	798 aa	Known RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CLLU1	Q5K131	121 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CD200R1L	Q6Q8B3	271 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RPTN	Q6XPR3	784 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	KLHL36	Q8N4N3	616 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR6M1	Q8NGM8	313 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	OR13C5	Q8NGS8	318 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	COQ8A	Q8NI60	647 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LHFPL5	Q8TAF8	219 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZG16B	Q96DA0	208 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ARSG	Q96EG1	525 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CXorf58	Q96LI9	332 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZNF578	Q96N58	590 aa	Predicted RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GSX2	Q9BZM3	304 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	NT5DC2	Q9H857	520 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	DLL4	Q9NR61	685 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	EXOSC1	Q9Y3B2	195 aa	Known RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MAGEB4	O15481	346 aa	Predicted RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SLC19A2	O60779	497 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	REM1	O75628	298 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	PPM1B	O75688	479 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	SNRPB	P14678	240 aa	Known RBP	5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	CCKBR	P32239	447 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ACVR1B	P36896	505 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ZP1	P60852	638 aa		5.23	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TAP2	Q03519	686 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms