RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 C12orf10Q9HB07 376 aa13.58□□□□□ -0.24
TSFM-207ENST00000540550 INPP5EQ9NRR6 644 aa13.58□□□□□ -0.24
TSFM-207ENST00000540550 FBXO4Q9UKT5 387 aa13.58□□□□□ -0.24
TSFM-207ENST00000540550 CAB39Q9Y376 341 aaPredicted RBP13.58□□□□□ -0.24
TSFM-207ENST00000540550 IER3IP1Q9Y5U9 82 aa13.58□□□□□ -0.24
TSFM-207ENST00000540550 PEX16Q9Y5Y5 336 aa13.58□□□□□ -0.24
TSFM-207ENST00000540550 ASCC3Q8N3C0 2202 aaKnown RBP13.58□□□□□ -0.24
TSFM-207ENST00000540550 hCG_2014768A0A024R1R8 64 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 MCIDASD6RGH6 385 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 J3QRE1 110 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 PLD2O14939 933 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 SCO2O43819 266 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 GMFGO60234 142 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 NUDT14O95848 222 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 TACR3P29371 465 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 GABRA5P31644 462 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 RPS25P62851 125 aaKnown RBP13.57□□□□□ -0.24
TSFM-207ENST00000540550 SLC23A3Q6PIS1 610 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 ZNF322Q6U7Q0 402 aaPredicted RBP13.57□□□□□ -0.24
TSFM-207ENST00000540550 BPHLQ86WA6 291 aaPredicted RBP13.57□□□□□ -0.24
TSFM-207ENST00000540550 TMEM99Q8N816 258 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 ZNF485Q8NCK3 441 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 OR4K13Q8NH42 304 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 DEPDC7Q96QD5 511 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 OCIAD1Q9NX40 245 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 CRNNQ9UBG3 495 aaPredicted RBP13.57□□□□□ -0.24
TSFM-207ENST00000540550 EXPH5Q8NEV8 1989 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 TECTAO75443 2155 aa13.57□□□□□ -0.24
TSFM-207ENST00000540550 D6RAR5 112 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 KHNYNO15037 678 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 PGCP20142 388 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 SLC2A5P22732 501 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 EVI2BP34910 448 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ACSM1Q08AH1 577 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 POU4F2Q12837 409 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 EFR3AQ14156 821 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ZNF74Q16587 644 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 RGS21Q2M5E4 152 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 CRTC2Q53ET0 693 aaPredicted RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 ZNF362Q5T0B9 420 aaPredicted RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 LCN1P1Q5VSP4 162 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 TUBA3EQ6PEY2 450 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ZFP41Q8N8Y5 198 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 SDR9C7Q8NEX9 313 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 TRMT61AQ96FX7 289 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 TBX5Q99593 518 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 SEMA4CQ9C0C4 833 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 RERGLQ9H628 205 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 APMAPQ9HDC9 416 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 NANSQ9NR45 359 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 TXNL4BQ9NX01 149 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 IDH3BO43837 385 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ONECUT2O95948 504 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 GP1BBP13224 206 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 CXCR1P25024 350 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 MST1P26927 711 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 RPS19P39019 145 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 RORCP51449 518 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 RPS4XP62701 263 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 ACTC1P68032 377 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ACTA1P68133 377 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 CBFBQ13951 182 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 IL11RAQ14626 422 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 GXYLT1Q4G148 440 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 C22orf42Q6IC83 251 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 PAPD4Q6PIY7 484 aaKnown RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 BTLAQ7Z6A9 289 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 KLBQ86Z14 1044 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ATP6V1C2Q8NEY4 427 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 OR5W2Q8NH69 310 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 KCTD7Q96MP8 289 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 CTRCQ99895 268 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 ZNF649Q9BS31 505 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 CRB3Q9BUF7 120 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 RTN4RQ9BZR6 473 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 SNTG1Q9NSN8 517 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 C19orf25Q9UFG5 118 aaPredicted RBP13.56□□□□□ -0.24
TSFM-207ENST00000540550 GSTK1Q9Y2Q3 226 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
TSFM-207ENST00000540550 VSTM2BA6NLU5 285 aa13.55□□□□□ -0.24
TSFM-207ENST00000540550 TAF4O00268 1085 aa13.55□□□□□ -0.24
TSFM-207ENST00000540550 CDC40O60508 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSFM-207ENST00000540550 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
TSFM-207ENST00000540550 CLUP10909 449 aa13.55□□□□□ -0.24
TSFM-207ENST00000540550 FGF5P12034 268 aa13.55□□□□□ -0.24
TSFM-207ENST00000540550 RUNX1T1Q06455 604 aa13.55□□□□□ -0.24
TSFM-207ENST00000540550 TRA2AQ13595 282 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSFM-207ENST00000540550 GALEQ14376 348 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms