RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PISDQ9UG56 409 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 OSGIN1Q9UJX0 560 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 IER3IP1Q9Y5U9 82 aa20.45■□□□□ 0.86
HOMER3-204ENST00000539827 EXPH5Q8NEV8 1989 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 RIIAD1A6NNX1 92 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 PRR23D1E9PI22 279 aaPredicted RBP20.44■□□□□ 0.86
HOMER3-204ENST00000539827 SLC22A1O15245 554 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 CDC40O60508 579 aaKnown RBP eCLIP20.44■□□□□ 0.86
HOMER3-204ENST00000539827 STK17BO94768 372 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 PRR23D2P0DMB1 279 aaPredicted RBP20.44■□□□□ 0.86
HOMER3-204ENST00000539827 MYL12AP19105 171 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 LTBQ06643 244 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 SPEM2Q0P670 501 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 ITGADQ13349 1161 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 ZNF74Q16587 644 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 KLHL12Q53G59 568 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 NIPAL3Q6P499 406 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 GID4Q8IVV7 300 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 CYB561A3Q8NBI2 242 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 GPR119Q8TDV5 335 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 PTP4A1Q93096 173 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 TMCO6Q96DC7 493 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 MOGAT1Q96PD6 335 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 TMEM9BQ9NQ34 198 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 CHCHD3Q9NX63 227 aaKnown RBP20.44■□□□□ 0.86
HOMER3-204ENST00000539827 MYOTQ9UBF9 498 aa20.44■□□□□ 0.86
HOMER3-204ENST00000539827 OR2J2O76002 312 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 PEPDP12955 493 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 CXCR1P25024 350 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 RPL4P36578 427 aaKnown RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 CLK1P49759 484 aaKnown RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 CRMP1Q14194 572 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 QPRTQ15274 297 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 MEPCEQ7L2J0 689 aaKnown RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 SLC37A3Q8NCC5 494 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 MOSPD2Q8NHP6 518 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 KTI12Q96EK9 354 aaPredicted RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 DNAJA3Q96EY1 480 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 C12orf10Q9HB07 376 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 GALNT9Q9HCQ5 603 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 EXOGQ9Y2C4 368 aaKnown RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 MPDZO75970 2070 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 IGHV1-45A0A0A0MS14 117 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 SSX1Q16384 188 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 ISXQ2M1V0 245 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 COL28A1Q2UY09 1125 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 OR2G6Q5TZ20 316 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 BICRALQ6AI39 1079 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 LYPD8Q6UX82 237 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 OR2Y1Q8NGV0 311 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 ELP5Q8TE02 316 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 OR51V1Q9H2C8 321 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 CHRNA9Q9UGM1 479 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 EXOSC1Q9Y3B2 195 aaKnown RBP20.43■□□□□ 0.86
HOMER3-204ENST00000539827 HS3ST3B1Q9Y662 390 aa20.43■□□□□ 0.86
HOMER3-204ENST00000539827 LOC100506127A0A0U1RQW1 187 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 M0R3G1 203 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 COX6A1P12074 109 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 ATP6V1E1P36543 226 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 SOX3P41225 446 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 FOLR3P41439 243 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 ARHGAP11AQ6P4F7 1023 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 NUP54Q7Z3B4 507 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 LHFPL3Q86UP9 236 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 SLC43A2Q8N370 569 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 OR52E2Q8NGJ4 325 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 OR51G2Q8NGK0 314 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 OR4K13Q8NH42 304 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 ZNF700Q9H0M5 742 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 TAS2R10Q9NYW0 307 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 ADAM18Q9Y3Q7 739 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 WDR87Q6ZQQ6 2873 aa20.42■□□□□ 0.86
HOMER3-204ENST00000539827 C4orf47A7E2U8 309 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 BLOC1S5-TXNDC5H3BN57 136 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 CCRL2O00421 344 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 CLUP10909 449 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 ZNF3P17036 446 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 NAGAP17050 411 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 CD79BP40259 229 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 AQP2P41181 271 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 RAB15P59190 212 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 RPS7P62081 194 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 E2F1Q01094 437 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SOWAHCQ53LP3 525 aaPredicted RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 FAM98AQ8NCA5 519 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TBC1D15Q8TC07 691 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TAAR8Q969N4 342 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 RNF167Q9H6Y7 350 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 MMP25Q9NPA2 562 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 NANSQ9NR45 359 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 PCDHGA3Q9Y5H0 932 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 CCDC182A6NF36 153 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 IFNGP01579 166 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SCG5P05408 212 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 JMJD7P0C870 316 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 LIMS3P0CW19 117 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 LIMS4P0CW20 117 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 HIST1H1CP16403 213 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 RPS5P46782 204 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SLC16A1P53985 500 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms