RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 KLK11Q9UBX7 282 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF223Q9UK11 482 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 A6NCN8 305 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 FAM171A2A8MVW0 826 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF593O00488 134 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 OR5F1O95221 314 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ICAM2P13598 275 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 PVRP15151 417 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 UGT2B7P16662 529 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ATF1P18846 271 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 HTR1FP30939 366 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 NAA10P41227 235 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ACSM3Q53FZ2 586 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 PRRT3Q5FWE3 981 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ZC3H14Q6PJT7 736 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF782Q6ZMW2 699 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ZAR1Q86SH2 424 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 FRMD1Q8N878 549 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 GALNT6Q8NCL4 622 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 OR52B4Q8NGK2 314 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 CA10Q9NS85 328 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 PILRAQ9UKJ1 303 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 A0A1W2PPL8 197 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 LINC00862A6NCI5 91 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 IDSB3KWA1 339 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 HCRTR1O43613 425 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 FGF17O60258 216 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC19A2O60779 497 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 CTSBP07858 339 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 CPMP14384 443 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 NTSR1P30989 418 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ACTR1BP42025 376 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ACTR1AP61163 376 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 SRSF5Q13243 272 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 GSG1Q2KHT4 349 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 HBMQ6B0K9 141 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 GPR139Q6DWJ6 353 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 THSD4Q6ZMP0 1018 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 OAFQ86UD1 273 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 STPG2Q8N412 459 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 GHSRQ92847 366 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 YIPF5Q969M3 257 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 DNAJA3Q96EY1 480 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ELMOD3Q96FG2 381 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 GABRG3Q99928 467 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 PDCD1LG2Q9BQ51 273 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 TWSG1Q9GZX9 223 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ADAP2Q9NPF8 381 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC22A7Q9Y694 548 aa11.59□□□□□ -0.55
SFSWAP-208ENST00000539506 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.55
SFSWAP-208ENST00000539506 TPPPO94811 219 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 EGFP01133 1207 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 CT62P0C5K7 136 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 LAMP2P13473 410 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 NDUFV2P19404 249 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ANXA7P20073 488 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 RAD52P43351 418 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 DUSP8Q13202 625 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GRM7Q14831 915 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GXYLT1Q4G148 440 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 EXOSC6Q5RKV6 272 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OTPQ5XKR4 325 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR10G6Q8NH81 332 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GRHL3Q8TE85 626 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 RFKQ969G6 155 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 PEX11GQ96HA9 241 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GAL3ST1Q99999 423 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 IFT27Q9BW83 186 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF350Q9GZX5 532 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 HEBP2Q9Y5Z4 205 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 DUXAA6NLW8 204 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ARPC1BO15143 372 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ADAM11O75078 769 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TRIM3O75382 744 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 IL9P15248 144 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 GPR18Q14330 331 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 EXOSC7Q15024 291 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ODF4Q2M2E3 257 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 MRPL2Q5T653 305 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TMEM81Q6P7N7 255 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 DGAT2L6Q6ZPD8 337 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 USP53Q70EK8 1073 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 LSM14AQ8ND56 463 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR51Q1Q8NH59 317 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 TTC9Q92623 222 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 KISS1RQ969F8 398 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 SFXN2Q96NB2 322 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 OR52D1Q9H346 318 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 FN3KQ9H479 309 aa11.58□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF69Q9UC07 566 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms