RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TP53P04637 393 aaPredicted RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 LCKP06239 509 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 HEXBP07686 556 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 CCNYL3P0C7X3 344 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 NPIPA8P0DM63 369 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 IL7P13232 177 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ENDOUP21128 410 aaKnown RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 GTF2E2P29084 291 aaKnown RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 GGT2P36268 569 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 LIPAP38571 399 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ATP12AP54707 1039 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 GABREP78334 506 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 RPP38P78345 283 aaKnown RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 ALDH6A1Q02252 535 aaKnown RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 ST3GAL3Q11203 375 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 FGFBP1Q14512 234 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 TRAM2Q15035 370 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 EBPQ15125 230 aaKnown RBP8.12□□□□□ -1.11
DDB1-213ENST00000539332 CARTPTQ16568 116 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 CCDC58Q4VC31 144 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ENTPD8Q5MY95 495 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ARMC4Q5T2S8 1044 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 PDZK1Q5T2W1 519 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 C1orf94Q6P1W5 598 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 PLBD1Q6P4A8 553 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 LANCL3Q6ZV70 420 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 AHSA2Q719I0 299 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ZNF767PQ75MW2 155 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 PLCZ1Q86YW0 608 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 CCDC28AQ8IWP9 274 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 FAM71CQ8NEG0 241 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 C17orf47Q8NEP4 570 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 OR4K5Q8NGD3 323 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 OR1N1Q8NGS0 311 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ST6GAL2Q96JF0 529 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 MCHR1Q99705 422 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 DHRS9Q9BPW9 319 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 CRB3Q9BUF7 120 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 NUDT9Q9BW91 350 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 SLC22A4Q9H015 551 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 ZNF556Q9HAH1 456 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 CLCA3PQ9Y6N3 262 aa8.12□□□□□ -1.11
DDB1-213ENST00000539332 APC2O95996 2303 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 A0A087WUU8 490 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 M0R082 166 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ALOX12BO75342 701 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 WBP4O75554 376 aaKnown RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 CYP4B1P13584 511 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 OSMP13725 252 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 GABRB1P18505 474 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 TNNI3P19429 210 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 SDHBP21912 280 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 MMP11P24347 488 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 HTR2AP28223 471 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ADH7P40394 386 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 EMP2P54851 167 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 TAS2R41P59536 307 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 PSPHP78330 225 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 COX10Q12887 443 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 DECR1Q16698 335 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 FNDC7Q5VTL7 733 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 FAM69BQ5VUD6 431 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 FAAH2Q6GMR7 532 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 TMEM205Q6UW68 189 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 PLEKHM3Q6ZWE6 761 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 GDF7Q7Z4P5 450 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ANKRD37Q7Z713 158 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 RANBP3LQ86VV4 465 aaPredicted RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 C9orf40Q8IXQ3 194 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 TCTE3Q8IZS6 198 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ESX1Q8N693 406 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 NFAM1Q8NET5 270 aaPredicted RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 METTL21AQ8WXB1 218 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ACOT11Q8WXI4 607 aaPredicted RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 WDFY2Q96P53 400 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 CITED4Q96RK1 184 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 MESP1Q9BRJ9 268 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 UCK2Q9BZX2 261 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 OR8D2Q9GZM6 311 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 NXF5Q9H1B4 397 aaKnown RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 NIPAL2Q9H841 368 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 DNAJB12Q9NXW2 375 aaKnown RBP8.11□□□□□ -1.11
DDB1-213ENST00000539332 KLHL21Q9UJP4 597 aa8.11□□□□□ -1.11
DDB1-213ENST00000539332 FRYQ5TBA9 3013 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 SLC35F4A4IF30 521 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 TRAPPC13A5PLN9 417 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 EFCAB10A6NFE3 127 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CPSF4LA6NMK7 179 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 A8MUA0 341 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CDRT15L2A8MXV6 281 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 B8ZZF3 427 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 OR10H3O60404 316 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 MPZL2O60487 215 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 NGFRP08138 427 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 PRG2P13727 222 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 TCN2P20062 427 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CHMP24386 653 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms