RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF860A6NHJ4 632 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 INMT-MINDY4F8WBC2 141 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 NKX2-2O95096 273 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 PEPDP12955 493 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 SLC6A1P30531 599 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ACSL1P33121 698 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RBM34P42696 430 aaKnown RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 PITPNBP48739 271 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 GZMKP49863 264 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF85Q03923 595 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 TCEA2Q15560 299 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RSPO4Q2I0M5 234 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 FIGNL1Q6PIW4 674 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 PLCZ1Q86YW0 608 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 GRAMD2AQ8IUY3 354 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 BAHD1Q8TBE0 780 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 SMPDL3BQ92485 455 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 TRIM63Q969Q1 353 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 LRFN5Q96NI6 719 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 THAP7Q9BT49 309 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 OR51V1Q9H2C8 321 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 PPIL3Q9H2H8 161 aaKnown RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ERVMER34-1Q9H9K5 563 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 FSCN3Q9NQT6 498 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ZMIZ1Q9ULJ6 1067 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 MRPS2Q9Y399 296 aaKnown RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 A6NL46 340 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 E9PI62 339 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RASGRP1O95267 797 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 IFNGP01579 166 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 EIF4EP06730 217 aaKnown RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 SLC16A1P53985 500 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 NRG3P56975 720 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 TNK1Q13470 666 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 EFR3AQ14156 821 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 GPR18Q14330 331 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 GPR176Q14439 515 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 Q5BKY6 102 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 DMKNQ6E0U4 476 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RNF44Q7L0R7 432 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 CEACAM19Q7Z692 300 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 OR4M1Q8NGD0 313 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 OR10G6Q8NH81 332 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 RASD1Q9Y272 281 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
CDCA3-207ENST00000538862 A0A0G2JK05 382 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 GXYLT2A0PJZ3 443 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 FAM221BA6H8Z2 402 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 C2orf74A8MZ97 194 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 H0Y8X5 98 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 J3QLW9 94 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-207ENST00000538862 SERPINA3P01011 423 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF19P17023 458 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 NOS3P29474 1203 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 SLC6A6P31641 620 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 E2F1Q01094 437 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 PLAURQ03405 335 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 CRMP1Q14194 572 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 EXOSC7Q15024 291 aaKnown RBP13.38□□□□□ -0.27
CDCA3-207ENST00000538862 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 ARHGAP11AQ6P4F7 1023 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 CA13Q8N1Q1 262 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 ESX1Q8N693 406 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 SAMD12Q8N8I0 201 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 OR51A7Q8NH64 312 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 DOK4Q8TEW6 326 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 PGLYRP3Q96LB9 341 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 GTPBP2Q9BX10 602 aaKnown RBP13.38□□□□□ -0.27
CDCA3-207ENST00000538862 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 SERTAD3Q9UJW9 196 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 PILRBQ9UKJ0 227 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 CA5BQ9Y2D0 317 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 CACNA1EQ15878 2313 aa13.38□□□□□ -0.27
CDCA3-207ENST00000538862 TRAV27A0A087WT01 109 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 RFPL3O75679 317 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 CT62P0C5K7 136 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 AHCYP23526 432 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ID4P47928 161 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 OR12D2P58182 307 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 SRP54P61011 504 aaKnown RBP13.37□□□□□ -0.27
CDCA3-207ENST00000538862 MAB21L1Q13394 359 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ZSWIM7Q19AV6 140 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
CDCA3-207ENST00000538862 PLA1AQ53H76 456 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms