RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 BBC3Q96PG8 261 aaPredicted RBP15.6■□□□□ 0.09
CLN6-202ENST00000538696 GPA33Q99795 319 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 UCK2Q9BZX2 261 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 GRIP2Q9C0E4 1043 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 OR2B2Q9GZK3 357 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 PTGES2Q9H7Z7 377 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 MED17Q9NVC6 651 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 DKKL1Q9UK85 242 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 TFECO14948 347 aaPredicted RBP15.59■□□□□ 0.09
CLN6-202ENST00000538696 LYNP07948 512 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 DPP4P27487 766 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 CHN2P52757 468 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 DSCR4P56555 118 aaPredicted RBP15.59■□□□□ 0.09
CLN6-202ENST00000538696 NFATC3Q12968 1075 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 NPRL3Q12980 569 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 QPRTQ15274 297 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 PRR30Q53SZ7 412 aaPredicted RBP15.59■□□□□ 0.09
CLN6-202ENST00000538696 KRT80Q6KB66 452 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 SIAH3Q8IW03 269 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 PARP8Q8N3A8 854 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 LSM14AQ8ND56 463 aaKnown RBP15.59■□□□□ 0.09
CLN6-202ENST00000538696 PIGXQ8TBF5 258 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 RNF217Q8TC41 542 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 PITX2Q99697 317 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 ZDHHC11Q9H8X9 412 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 REV1Q9UBZ9 1251 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 VDAC3Q9Y277 283 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 ZNF407Q9C0G0 2248 aa15.59■□□□□ 0.09
CLN6-202ENST00000538696 MED12Q93074 2177 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 CHP2O43745 196 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 NUDT14O95848 222 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 HPNP05981 417 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 LINGO3P0C6S8 592 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 HK1P19367 917 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 PGCP20142 388 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 TCEA1P23193 301 aaKnown RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 MST1P26927 711 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 ZNF41P51814 821 aaPredicted RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 TPD52P55327 224 aaPredicted RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 ALDH6A1Q02252 535 aaKnown RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 FOXF1Q12946 379 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 TOMM20Q15388 145 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 PLPPR5Q32ZL2 321 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 ZNF691Q5VV52 312 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 C1orf94Q6P1W5 598 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 FAM180AQ6UWF9 173 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 MBOAT2Q6ZWT7 520 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 NRMQ8IXM6 262 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 CISD2Q8N5K1 135 aaKnown RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 LSMEM1Q8N8F7 131 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 FAM83FQ8NEG4 500 aaPredicted RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 GNPDA2Q8TDQ7 276 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 NPAS1Q99742 590 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 TSPAN10Q9H1Z9 355 aaPredicted RBP15.58■□□□□ 0.08
CLN6-202ENST00000538696 PNPLA3Q9NST1 481 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 QPCTLQ9NXS2 382 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 TAS2R10Q9NYW0 307 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 GMPPBQ9Y5P6 360 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 LIPGQ9Y5X9 500 aa15.58■□□□□ 0.08
CLN6-202ENST00000538696 DNAJC13O75165 2243 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 MAGEA13PA6NCF6 341 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 SHISA8B8ZZ34 492 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 ZIC3O60481 467 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 TRAPPC6AO75865 159 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 WISP1O95388 367 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 SOX14O95416 240 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 CRYABP02511 175 aaKnown RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 TP53P04637 393 aaPredicted RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 IGFBP1P08833 259 aaPredicted RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 PRKCAP17252 672 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 OMPP47874 163 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 GSSP48637 474 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 FOXK1P85037 733 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 IL18R1Q13478 541 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 KEAP1Q14145 624 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 WIPI1Q5MNZ9 446 aaPredicted RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 ZNF324BQ6AW86 544 aaPredicted RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 YRDCQ86U90 279 aaKnown RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 C8orf59Q8N0T1 100 aaPredicted RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 PFN4Q8NHR9 129 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 ZNF563Q8TA94 476 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 POC1BQ8TC44 478 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 TMEM239Q8WW34 195 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 SNRNP40Q96DI7 357 aaKnown RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 DTNBP1Q96EV8 351 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 FAM46AQ96IP4 442 aaKnown RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 DEFB127Q9H1M4 99 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 SLC6A15Q9H2J7 730 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 RPS6KB2Q9UBS0 482 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 NDRG4Q9ULP0 352 aaKnown RBP15.57■□□□□ 0.08
CLN6-202ENST00000538696 MPDZO75970 2070 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 NBEAQ8NFP9 2946 aa15.57■□□□□ 0.08
CLN6-202ENST00000538696 BOD1L1Q8NFC6 3051 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 IGSF10Q6WRI0 2623 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 SHANK1Q9Y566 2161 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 SPTA1P02549 2419 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 A0A087WZY1 265 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 FAM47E-STBD1D6RA91 191 aa15.56■□□□□ 0.08
CLN6-202ENST00000538696 NPIPA5E9PKD4 350 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms