RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 RPL35P42766 123 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 DUSP2Q05923 314 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 POU4F2Q12837 409 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF750Q32MQ0 723 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 TMEM69Q5SWH9 247 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF793Q6ZN11 406 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 TMEM17Q86X19 198 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF547Q8IVP9 402 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 SERPINA12Q8IW75 414 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 DCUN1D3Q8IWE4 304 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 OR10K1Q8NGX5 313 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 GIMAP5Q96F15 307 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 LINC00615Q96LM1 132 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 PRSS27Q9BQR3 290 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF443Q9Y2A4 671 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 PYCARD-AS1I3L0S3 204 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 IGF2P01344 180 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 VSIG10L2P0DP72 767 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 CLUP10909 449 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 ERGP11308 486 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 MST1P26927 711 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 LGALS3BPQ08380 585 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 OR7E24Q6IFN5 339 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 THSD4Q6ZMP0 1018 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 FCRLAQ7L513 359 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 LURAP1LQ8IV03 231 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 C1orf216Q8TAB5 229 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 HERVK_113Q902F9 699 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 PHYHIPQ92561 330 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 PELI1Q96FA3 418 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 MFFQ9GZY8 342 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 ANKRD10Q9NXR5 420 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC39A1Q9NY26 324 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 FOXJ3Q9UPW0 622 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 XIRP2A4UGR9 3374 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SIGLEC5O15389 551 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 TMEM127O75204 238 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SRMP19623 302 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 PDX1P52945 283 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 ART1P52961 327 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 PPP2CBP62714 309 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 PPP2CAP67775 309 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SIRPAP78324 504 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SIGLEC14Q08ET2 396 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 CSRP2Q16527 193 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC36A1Q7Z2H8 476 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 TMCO2Q7Z6W1 182 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 RNF113BQ8IZP6 322 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 SYS1Q8N2H4 156 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 RELL2Q8NC24 303 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 NUP43Q8NFH3 380 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 VN1R2Q8NFZ6 395 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 OR2AK2Q8NG84 335 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 OR52A5Q9H2C5 316 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 C20orf141Q9NUB4 165 aa17.16■□□□□ 0.34
SFSWAP-207ENST00000538548 FMO6PO60774 539 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 CD1AP06126 327 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 RAB40ALP0C0E4 278 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ACTA2P62736 377 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ACTG2P63267 376 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC7A9P82251 487 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC9A5Q14940 896 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ARHGAP19Q14CB8 494 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 C2orf68Q2NKX9 166 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 RFLNBQ8N5W9 214 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 OR2L2Q8NH16 312 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 RAB40AQ8WXH6 277 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF514Q96K75 400 aaPredicted RBP17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 GFI1Q99684 422 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 NRTNQ99748 197 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 MLXQ9UH92 298 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 SZT2Q5T011 3432 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 HOXA2O43364 376 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 CTSLP07711 333 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF3P17036 446 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 PSMB5P28074 263 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 MC3RP41968 323 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 CRMP1Q14194 572 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 RBMS2Q15434 407 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 MPPED2Q15777 294 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 POM121L1PQ3SYA9 428 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 RPL22L1Q6P5R6 122 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 UNQ9370/PRO34162Q6UXP9 181 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 PFN4Q8NHR9 129 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 C15orf40Q8WUR7 153 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 ARMC5Q96C12 935 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 TCEAL4Q96EI5 215 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 DTD2Q96FN9 168 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 TTTY10Q9BZA0 68 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 PCBD2Q9H0N5 130 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 TAS2R3Q9NYW6 316 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 FBXL4Q9UKA2 621 aa17.15■□□□□ 0.34
SFSWAP-207ENST00000538548 TRAPPC13A5PLN9 417 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 GOSR2O14653 212 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 CLEC3AO75596 197 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 UBBP0CG47 229 aa17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 UBCP0CG48 685 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 RPS27AP62979 156 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-207ENST00000538548 UBA52P62987 128 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms