RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PRKACBP22694 351 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 C17orf67Q0P5P2 114 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SLX4IPQ5VYV7 408 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SEMA6CQ9H3T2 930 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 MMACHCQ9Y4U1 282 aa15.67■□□□□ 0.1
SCARB1-205ENST00000538291 SERINC4A6NH21 518 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 H0YIV9 168 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 PPP6CO00743 305 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 HCRTR1O43613 425 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 GJB3O75712 270 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 TK1P04183 234 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 CA5AP35218 305 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ADRA1AP35348 466 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ALKAL1Q6UXT8 129 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 SERPINA12Q8IW75 414 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF775Q96BV0 537 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 FAM183AA6NL82 134 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 FOXD2O60548 495 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 PAHP00439 452 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 TFP02787 698 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 KIF18BQ86Y91 864 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 BRIX1Q8TDN6 353 aaKnown RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 LCORQ96JN0 433 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 UBXN10Q96LJ8 280 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 PIGQQ9BRB3 760 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 TXLNGYQ9BZA5 131 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 FUOMA2VDF0 154 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 CD27P26842 260 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 CXADRP78310 365 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 SIRPAP78324 504 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 FRMPD2BQ6IN97 320 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 LCN10Q6JVE6 187 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 GPR155Q7Z3F1 870 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ZADH2Q8N4Q0 377 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 UPRTQ96BW1 309 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 SNX18Q96RF0 628 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 C1orf198Q9H425 327 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF286AQ9HBT8 521 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 PCDHGA1Q9Y5H4 931 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 IMPA1P29218 277 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 MGAT3Q09327 533 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 KLHDC9Q8NEP7 349 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 MALSU1Q96EH3 234 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 C7orf50Q9BRJ6 194 aaKnown RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 DHCR7Q9UBM7 475 aaKnown RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 HS3ST3A1Q9Y663 406 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 F2RL1P55085 397 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 PAQR9Q6ZVX9 377 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 C3orf30Q96M34 536 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 CMSS1Q9BQ75 279 aaKnown RBP15.66■□□□□ 0.1
SCARB1-205ENST00000538291 SLC19A3Q9BZV2 496 aa15.66■□□□□ 0.1
SCARB1-205ENST00000538291 MEIS3P1A6NDR6 274 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 RNF212BA8MTL3 300 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 AP1G1O43747 822 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 IFNA17P01571 189 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CDK1P06493 297 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ALDH3B1P43353 468 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ARPC5O15511 151 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CCL11P51671 97 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 OR7G2Q8NG99 324 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 SLC46A1Q96NT5 459 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 OLAHQ9NV23 265 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 SDK1Q7Z5N4 2213 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 UBFD1O14562 309 aaKnown RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 TPPPO94811 219 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 SLC34A2O95436 690 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ITGAMP11215 1152 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 NR4A2P43354 598 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 TSPAN31Q12999 210 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 KRBOX4Q5JUW0 171 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 GTF2H4Q92759 462 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 THAP7Q9BT49 309 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 MYH11P35749 1972 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 GAPDHSO14556 408 aaPredicted RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ARPC1BO15143 372 aaKnown RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ENPP1P22413 925 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 OPRD1P41143 372 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 EIF1P41567 113 aaKnown RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CARD18P57730 90 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CATR1Q13166 79 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 NKAIN2Q5VXU1 208 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CST9Q5W186 159 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ZNF529Q6P280 563 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 RPL22L1Q6P5R6 122 aaKnown RBP15.65■□□□□ 0.1
SCARB1-205ENST00000538291 STK35Q8TDR2 534 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ARL11Q969Q4 196 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 SLC6A18Q96N87 628 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 ANKRD19PQ9H560 264 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 CALHM2Q9HA72 323 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 MARCH5Q9NX47 278 aa15.65■□□□□ 0.1
SCARB1-205ENST00000538291 EIF1BO60739 113 aaKnown RBP15.64■□□□□ 0.09
SCARB1-205ENST00000538291 MMP12P39900 470 aa15.64■□□□□ 0.09
SCARB1-205ENST00000538291 REEP5Q00765 189 aa15.64■□□□□ 0.09
SCARB1-205ENST00000538291 SF3A2Q15428 464 aaKnown RBP15.64■□□□□ 0.09
SCARB1-205ENST00000538291 COX15Q7KZN9 410 aa15.64■□□□□ 0.09
SCARB1-205ENST00000538291 ZNF808Q8N4W9 903 aaPredicted RBP15.64■□□□□ 0.09
SCARB1-205ENST00000538291 OR4D6Q8NGJ1 314 aa15.64■□□□□ 0.09
SCARB1-205ENST00000538291 OR13C2Q8NGS9 318 aa15.64■□□□□ 0.09
SCARB1-205ENST00000538291 AGPAT4Q9NRZ5 378 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms