RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RAB40AQ8WXH6 277 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FOXJ1Q92949 421 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR2A7Q96R45 310 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ARHGAP9Q9BRR9 750 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ADAM19Q9H013 955 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FLVCR2Q9UPI3 526 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DTX4Q9Y2E6 619 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SMCO3A2RU48 225 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RAB3DO95716 219 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PRF1P14222 555 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 KCNE1P15382 129 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 BPIP17213 487 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TACR1P25103 407 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 XCR1P46094 333 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ACTA2P62736 377 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ACTG2P63267 376 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FAM74A1Q5RGS3 127 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FUT10Q6P4F1 479 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TEX26Q8N6G2 289 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CYB561A3Q8NBI2 242 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 MDGA1Q8NFP4 955 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 HUS1BQ8NHY5 278 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZBTB8AQ96BR9 441 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SEC22AQ96IW7 307 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SPACA7Q96KW9 195 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 REG4Q9BYZ8 158 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 METTL1Q9UBP6 276 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLC9B1P1A6NJY1 282 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ACOT7O00154 380 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 B3GALT4O96024 378 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CRYABP02511 175 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CNR1P21554 472 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 NME2P22392 152 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PMELP40967 661 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CCR8P51685 355 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 HTRA3P83110 453 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 HFEQ30201 348 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CHRFAM7AQ494W8 412 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ENPP7Q6UWV6 458 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TMIGD1Q6UXZ0 262 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 NAA40Q86UY6 237 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 COMMD1Q8N668 190 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR10R2Q8NGX6 335 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TERB2Q8NHR7 220 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DOK4Q8TEW6 326 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PLD4Q96BZ4 506 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 FOXRED1Q96CU9 486 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 OR5B12Q96R08 314 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ATF6BQ99941 703 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 EVA1AQ9H8M9 152 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TUBG2Q9NRH3 451 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 DHDHQ9UQ10 334 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CARHSP1Q9Y2V2 147 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 MCRIP1C9JLW8 97 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 GPR39O43194 453 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PPP1R3DO95685 299 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ITGBL1O95965 494 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SOD1P00441 154 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ERCC1P07992 297 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PTAFRP25105 342 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 UBE2IP63279 158 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 MAPK14Q16539 360 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 AFMIDQ63HM1 303 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM173Q86WV6 379 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 NKAIN4Q8IVV8 208 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 PNLDC1Q8NA58 520 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SUN3Q8TAQ9 357 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 LGALS14Q8TCE9 139 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 C16orf78Q8WTQ4 265 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 SLAMF9Q96A28 289 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZMYND19Q96E35 227 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 LMLNQ96KR4 655 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 C4orf36Q96KX1 117 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 CMKLR1Q99788 373 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 UTP23Q9BRU9 249 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 IER2Q9BTL4 223 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM121BQ9BXQ6 578 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 UNKLQ9H9P5 680 aaKnown RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 BRF2Q9HAW0 419 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 KCNJ16Q9NPI9 418 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF629Q9UEG4 869 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-213ENST00000537002 ADAM18Q9Y3Q7 739 aa5.04□□□□□ -1.6
PTPRD-213ENST00000537002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GABRR3A8MPY1 467 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FAM171A2A8MVW0 826 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TNFRSF10BO14763 440 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR1D2P34982 312 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 RAD52P43351 418 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MAGEB1P43366 347 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 UBE2NLQ5JXB2 153 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FIGNL1Q6PIW4 674 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 NDUFAF7Q7L592 441 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PRSS45Q7RTY3 260 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM150AQ86TG1 271 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DNAAF1Q8NEP3 725 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms