RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PDK3Q15120 406 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 PPA1Q15181 289 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 LIN52Q52LA3 116 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC2A7Q6PXP3 512 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 EPGNQ6UW88 154 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 MSANTD1Q6ZTZ1 278 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CADM2Q8N3J6 435 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 PMM1Q92871 262 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 NEUROG1Q92886 237 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 APH1AQ96BI3 265 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 TMEM19Q96HH6 336 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 GSX2Q9BZM3 304 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CALML5Q9NZT1 146 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 PRR14LQ5THK1 2151 aa12.63□□□□□ -0.39
RTN3P1-201ENST00000536295 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 TMEM247A6NEH6 219 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 CCT8L1PA6NM43 557 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 GPR171O14626 319 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 POLR3GO15318 223 aaPredicted RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF208O43345 1280 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 DNPH1O43598 174 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 RAD51DO75771 328 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 NUDT7P0C024 238 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 IMPDH2P12268 514 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 GGT1P19440 569 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 NTF4P34130 210 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 MAGEA8P43361 318 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 STX1BP61266 288 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 SLC35A1P78382 337 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 FBXW9Q5XUX1 488 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 PRSS57Q6UWY2 283 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 CLEC9AQ6UXN8 241 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF440Q8IYI8 595 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 LRRC8CQ8TDW0 803 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 MUCL1Q96DR8 90 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 C7orf26Q96N11 449 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 EBF4Q9BQW3 602 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 NAA11Q9BSU3 229 aaPredicted RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 CACYBPQ9HB71 228 aaKnown RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 SLCO1B3Q9NPD5 702 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 TCF7L2Q9NQB0 619 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 TRAPPC4Q9Y296 219 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 DSPPQ9NZW4 1301 aa12.62□□□□□ -0.39
RTN3P1-201ENST00000536295 CIB4A0PJX0 185 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 FAAHO00519 579 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 COX5AP20674 150 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 CXCR1P25024 350 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ACAA2P42765 397 aaKnown RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 IDH3AP50213 366 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ATP5J2P56134 94 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 COPZ1P61923 177 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 RPS4XP62701 263 aaKnown RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 LTBQ06643 244 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 FAPQ12884 760 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 BNIP2Q12982 314 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 TTMPQ5BVD1 217 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 SEZ6L2Q6UXD5 910 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 CASP12Q6UXS9 341 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 CLIP4Q8N3C7 705 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 OR52N5Q8NH56 324 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 MAL2Q969L2 176 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 FBXW5Q969U6 566 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 BDH2Q9BUT1 245 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ROS1P08922 2347 aa12.61□□□□□ -0.39
RTN3P1-201ENST00000536295 ARID1AO14497 2285 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 A0A0G2JPF8 293 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 A0A1W2PR80 420 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 OR5H1A6NKK0 313 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 HNRNPCL2B2RXH8 293 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 HNRNPCL3B7ZW38 293 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 CLIC1O00299 241 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 NR5A2O00482 541 aa12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 HNRNPCL1O60812 293 aaKnown RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 CNOT4O95628 575 aaKnown RBP12.6□□□□□ -0.39
RTN3P1-201ENST00000536295 SOD3P08294 240 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms