RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-205ENST00000536255 C3orf49Q96BT1 292 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 TPD52L3Q96J77 140 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 OR5B2Q96R09 309 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 RSPO3Q9BXY4 272 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-205ENST00000536255 PRRG4Q9BZD6 226 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 GMPR2Q9P2T1 348 aaKnown RBP12.14□□□□□ -0.47
RPAIN-205ENST00000536255 CD300AQ9UGN4 299 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 MAGEL2Q9UJ55 1249 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 RPS6KA6Q9UK32 745 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 PRPF19Q9UMS4 504 aaKnown RBP12.14□□□□□ -0.47
RPAIN-205ENST00000536255 SH3GLB1Q9Y371 365 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 HDGFL3Q9Y3E1 203 aa12.14□□□□□ -0.47
RPAIN-205ENST00000536255 ARHGAP21Q5T5U3 1957 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 A0A1B0GWA3 101 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ELOA3DA6NLF2 546 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 M0R3H8 397 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 CXCL13O43927 109 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 TMIGD3P0DMS9 266 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 PNMTP11086 282 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 PRF1P14222 555 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 IGFBP2P18065 325 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 CTSSP25774 331 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 SHC1P29353 583 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 RASSF2P50749 326 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 RAC3P60763 192 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 BNIP2Q12982 314 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 OR1Q1Q15612 314 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ELOA3BQ3SY89 546 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ALG10BQ5I7T1 473 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 EEF1A1P5Q5VTE0 462 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ZNF613Q6PF04 617 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 C5orf46Q6UWT4 87 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 MEX3BQ6ZN04 569 aaKnown RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 RINLQ6ZS11 566 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 TMPPEQ6ZT21 453 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 CBLL1Q75N03 491 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ELOA3Q8NG57 546 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 OR6T1Q8NGN1 323 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 VANGL1Q8TAA9 524 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 SLC47A1Q96FL8 570 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 ZNF845Q96IR2 970 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 MCHR1Q99705 422 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 POLR2J2Q9GZM3 115 aaKnown RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 POLR2J3Q9H1A7 115 aaKnown RBP12.13□□□□□ -0.47
RPAIN-205ENST00000536255 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
RPAIN-205ENST00000536255 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 A0A0B4J2E0 115 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 A0A1B0GX12 115 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 TMEM72A0PK05 275 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 A8MVM7 634 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 SULT2B1O00204 365 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 GYG2O15488 501 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 ATP5HO75947 161 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 RCBTB2O95199 551 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 PMS2P2O95744 297 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 ZNF682O95780 498 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 IL18BPO95998 194 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 SERPINA1P01009 418 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 NCK1P16333 377 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 CCNA2P20248 432 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 HTR2AP28223 471 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 IFNA8P32881 189 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 OPRM1P35372 400 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 ASCL1P50553 236 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 FOXF2Q12947 444 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 FXNQ16595 210 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 FKBP9P1Q75LS8 142 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 ATG4DQ86TL0 474 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-205ENST00000536255 CARM1Q86X55 608 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 FNDC9Q8TBE3 224 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 RNF217Q8TC41 542 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 STK35Q8TDR2 534 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 GEMIN6Q8WXD5 167 aaKnown RBP12.12□□□□□ -0.47
RPAIN-205ENST00000536255 ZHX1-C8orf76Q96EF9 292 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 POTEKPQ9BYX7 375 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 PCDHAC1Q9H158 963 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 MUC13Q9H3R2 512 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 COQ10BQ9H8M1 238 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 GORASP2Q9H8Y8 452 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 TAS2R1Q9NYW7 299 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 PACSIN3Q9UKS6 424 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 SAMD4AQ9UPU9 718 aaKnown RBP12.12□□□□□ -0.47
RPAIN-205ENST00000536255 TRAPPC4Q9Y296 219 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 SNX13Q9Y5W8 968 aa12.12□□□□□ -0.47
RPAIN-205ENST00000536255 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 TRAPPC13A5PLN9 417 aa12.11□□□□□ -0.47
RPAIN-205ENST00000536255 DNPH1O43598 174 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms