RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 IL6P05231 212 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 ALDOCP09972 364 aaKnown RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 DANCRP0C864 163 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 IGHV1-2P23083 117 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 SLC1A3P43003 542 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 NME5P56597 212 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 OR2B6P58173 313 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 UFM1P61960 85 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 ZSWIM7Q19AV6 140 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 SEZ6L2Q6UXD5 910 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 ZNF433Q8N7K0 673 aaPredicted RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 KBTBD8Q8NFY9 601 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 LILRB1Q8NHL6 650 aaPredicted RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 CNOT9Q92600 299 aaKnown RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 SLC38A1Q9H2H9 487 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 THUMPD1Q9NXG2 353 aaKnown RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 CISD1Q9NZ45 108 aaKnown RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 P2RX2Q9UBL9 471 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 MALT1Q9UDY8 824 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 TMED7Q9Y3B3 224 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 MAGED1Q9Y5V3 778 aaPredicted RBP11.59□□□□□ -0.55
RTN3-207ENST00000536011 TMEM120BA0PK00 339 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 DPRXA6NFQ7 191 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ABCD4O14678 606 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 RAD51DO75771 328 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 CHRM4P08173 479 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 SOD3P08294 240 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.56
RTN3-207ENST00000536011 PTAFRP25105 342 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 PCSK6P29122 969 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 EPHA3P29320 983 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 COPZ1P61923 177 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 TGFBR3Q03167 851 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 TNK1Q13470 666 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 MPP2Q14168 576 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 SYPL1Q16563 259 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 NRF1Q16656 503 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 GSTA3Q16772 222 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 LIN52Q52LA3 116 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 AGAP6Q5VW22 663 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 NXNQ6DKJ4 435 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 CASP12Q6UXS9 341 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.58□□□□□ -0.56
RTN3-207ENST00000536011 ADGRG3Q86Y34 549 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ANKFN1Q8N957 763 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ZG16BQ96DA0 208 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ARL5BQ96KC2 179 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 TEX37Q96LM6 180 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 OR11A1Q9GZK7 315 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 ARMC7Q9H6L4 198 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 RMND5AQ9H871 391 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 NKIRAS1Q9NYS0 192 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 POU2F3Q9UKI9 436 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 GPR45Q9Y5Y3 372 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 CSPG4Q6UVK1 2322 aa11.58□□□□□ -0.56
RTN3-207ENST00000536011 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 GOLGA8QA0A0J9YX86 632 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 PRAMEF27A3QJZ7 478 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 GOLGA8OA6NCC3 632 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 CLDN24A6NM45 220 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 GOLGA8NF8WBI6 632 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 AP3D1O14617 1153 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 ZNF500O60304 480 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 SNNO75324 88 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 BCAS1O75363 584 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 SLC22A3O75751 556 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 ANP32DO95626 131 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 IGHV3-9P01782 118 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 TP53P04637 393 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 GPIP06744 558 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 CCNA2P20248 432 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 CXCR1P25024 350 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 TACR3P29371 465 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 CRISP3P54108 245 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 SLC18A1P54219 525 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 H3F3AP84243 136 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 DMTNQ08495 405 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 FAPQ12884 760 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 PDCD4Q53EL6 469 aaKnown RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 MRPL2Q5T653 305 aaKnown RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 SLC22A25Q6T423 547 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 PAQR6Q6TCH4 344 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 MSANTD1Q6ZTZ1 278 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 HMGN2P46Q86SG4 172 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 DTX2Q86UW9 622 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 C17orf78Q8N4C9 275 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 C1orf162Q8NEQ5 155 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 ADAD1Q96M93 576 aaKnown RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 INPP5KQ9BT40 448 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 WDR55Q9H6Y2 383 aaPredicted RBP11.57□□□□□ -0.56
RTN3-207ENST00000536011 UPB1Q9UBR1 384 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 DCTN4Q9UJW0 460 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
RTN3-207ENST00000536011 FAM234BA2RU67 622 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms