RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF350Q9GZX5 532 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OR51I1Q9H343 314 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 MYOZ1Q9NP98 299 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SLC17A5Q9NRA2 495 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 POLE3Q9NRF9 147 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TMEM181Q9P2C4 612 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 DCTN4Q9UJW0 460 aa11.38□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CENPVL1A0A0U1RR11 272 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FCMRO60667 390 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ITGA5P08648 1049 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ALDH3A1P30838 453 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SERPINB5P36952 375 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 KHKP50053 298 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 PRPS1P60891 318 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SLC35A1P78382 337 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SQLEQ14534 574 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FAM120AOSQ5T036 256 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CCDC103Q8IW40 242 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ARIH2OSQ8N7S6 290 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 XAGE5Q8WWM1 108 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ARL5BQ96KC2 179 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 VRK1Q99986 396 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CCDC106Q9BWC9 280 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TXLNGYQ9BZA5 131 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OR11A1Q9GZK7 315 aa11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-207ENST00000535958 DNAJA2O60884 412 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 LY6HO94772 140 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ERCC1P07992 297 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OR12D1P0DN82 309 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 G6PDP11413 515 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CDH2P19022 906 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 MPGP29372 298 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CHI3L1P36222 383 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 PGM1P36871 562 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 IDH2P48735 452 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 POLR2HP52434 150 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 GNA13Q14344 377 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 UGT3A2Q3SY77 523 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OR4F3Q6IEY1 312 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TNFAIP8L2Q6P589 184 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ZCCHC23Q6ZST2 131 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OLIG3Q7RTU3 272 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CLECL1Q8IZS7 167 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CLEC4FQ8N1N0 589 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ZNF540Q8NDQ6 660 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 KIF18AQ8NI77 898 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 PMM1Q92871 262 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 MECRQ9BV79 373 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SERHL2Q9H4I8 314 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 EXOSC3Q9NQT5 275 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 KCNE5Q9UJ90 142 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 MOKQ9UQ07 419 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TRAPPC4Q9Y296 219 aa11.36□□□□□ -0.59
TNFRSF1A-207ENST00000535958 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TLDC2A0PJX2 215 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 RNASET2O00584 256 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CPSF4O95639 269 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 UQCRC2P22695 453 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 NR4A2P43354 598 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FOXG1P55316 489 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 UBE2NP61088 152 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TSPO2Q5TGU0 170 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ANXA8L1Q5VT79 327 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TYW3Q6IPR3 259 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 EMBQ6PCB8 327 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SPATA19Q7Z5L4 167 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 RIMKLAQ8IXN7 391 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 POMGNT2Q8NAT1 580 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FAM71CQ8NEG0 241 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 RAB8BQ92930 207 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ROPN1LQ96C74 230 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 C3orf30Q96M34 536 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SORCS2Q96PQ0 1159 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 DPY30Q9C005 99 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SLC7A10Q9NS82 523 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 MKS1Q9NXB0 559 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FBXO9Q9UK97 447 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 FLVCR1Q9Y5Y0 555 aa11.35□□□□□ -0.59
TNFRSF1A-207ENST00000535958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■□□ 14.9
TNFRSF1A-207ENST00000535958 TMED7-TICAM2A0A0A6YYA0 188 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ZNF208O43345 1280 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SNUPNO95149 360 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 TGFAP01135 160 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CRYAAP02489 173 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 GPIP06744 558 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 PAX7P23759 505 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SRP14P37108 136 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 SLC1A3P43003 542 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 CLDN8P56748 225 aa11.34□□□□□ -0.59
TNFRSF1A-207ENST00000535958 KCNJ10P78508 379 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms