RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SSX5O60225 188 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 IVLP07476 585 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SBK2P0C263 348 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CT45A8P0DMV1 189 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CT45A9P0DMV2 189 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 DESP17661 470 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NELFEP18615 380 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 F8A1P23610 371 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PPP2R1BP30154 601 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ATP6V1E1P36543 226 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 OPRL1P41146 370 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ACTR1BP42025 376 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NSFP46459 744 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ZFP36L2P47974 494 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SLC1A6P48664 564 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CSNK1DP48730 415 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 YBEYP58557 167 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ACTR1AP61163 376 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CCZ1BP86790 482 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CCZ1P86791 482 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 OTUD4Q01804 1114 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 GNA12Q03113 381 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 AP1B1Q10567 949 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PPP1R8Q12972 351 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 RPA4Q13156 261 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CBX3Q13185 183 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 EIF4EBP2Q13542 120 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 GPR50Q13585 617 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 MEF2DQ14814 521 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SPHARQ15513 63 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 AARDQ4LEZ3 155 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 LBHQ53QV2 105 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CT45A2Q5DJT8 189 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SPANXN4Q5MJ08 99 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 AGAP7PQ5VUJ5 663 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NKAIN2Q5VXU1 208 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SPOPLQ6IQ16 392 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PMF1Q6P1K2 205 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PODNL1Q6PEZ8 512 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 TMEM110Q86TL2 294 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NELFCDQ8IXH7 590 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF440Q8IYI8 595 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 SFRP1Q8N474 314 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 GVQW1Q8N7I0 195 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CA5BP1Q8WTZ4 195 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PCNPQ8WW12 178 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ITLN2Q8WWU7 325 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 OR1E3Q8WZA6 343 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 C18orf12Q96KH6 178 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 PANX3Q96QZ0 392 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 RANBP9Q96S59 729 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 C19orf43Q9BQ61 176 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF559Q9BR84 538 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CHCHD5Q9BSY4 110 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 WRAP53Q9BUR4 548 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 NUDT9Q9BW91 350 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ZYG11BQ9C0D3 744 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CXXC4Q9H2H0 198 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 MOB1AQ9H8S9 216 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 APMAPQ9HDC9 416 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CNIH4Q9P003 139 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ERVK-18Q9QC07 812 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 KCNN3Q9UGI6 736 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 HMGXB4Q9UGU5 601 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 DNPEPQ9ULA0 475 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 MGAT4AQ9UM21 535 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 TRAF3IP3Q9Y228 551 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 TDRKHQ9Y2W6 561 aaKnown RBP2.74□□□□□ -1.97
SNHG1-202ENST00000535689 OR1A2Q9Y585 309 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 ANGPTL3Q9Y5C1 460 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
SNHG1-202ENST00000535689 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 ATRQ13535 2644 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 NUP210LQ5VU65 1888 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CSMD2Q7Z408 3487 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CHD3Q12873 2000 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 PHF3Q92576 2039 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 IGLV3-10A0A075B6K4 115 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 IGHV4-30-2A0A087WSY4 118 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SYCE3A1L190 88 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GPR89AB7ZAQ6 455 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 E9PQ18 207 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 K7ERQ8 282 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CHUKO15111 745 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 CETN3O15182 167 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 BUB1O43683 1085 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SNAP91O60641 907 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 ZNF821O75541 412 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GOSR1O95249 250 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 EPOP01588 193 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 JCHAINP01591 159 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 IGLV3-25P01717 112 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 PCCBP05166 539 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 PTMAP06454 111 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SNRPCP09234 159 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 HIST1H2AGP0C0S8 130 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 GPR89BP0CG08 455 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 EPB41P11171 864 aaKnown RBP2.73□□□□□ -1.97
SNHG1-202ENST00000535689 EDNRAP25101 427 aa2.73□□□□□ -1.97
SNHG1-202ENST00000535689 SRD5A2P31213 254 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms