RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FLVCR1Q9Y5Y0 555 aa9.83□□□□□ -0.84
CLSTN3-206ENST00000535668 FAM234BA2RU67 622 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 AGAP5A6NIR3 686 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 OR6C65A6NJZ3 312 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 PHF1O43189 567 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 TYROBPO43914 113 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 SSX4O60224 188 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 VAMP5O95183 116 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 SLU7O95391 586 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 BPGMP07738 259 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 EFNA1P20827 205 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 USF1P22415 310 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 MPGP29372 298 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC1A3P43003 542 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 GZMKP49863 264 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 PHC1P78364 1004 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC35A1P78382 337 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 LRRC74AQ0VAA2 488 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 EFNB3Q15768 340 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 STK11Q15831 433 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 ZSWIM7Q19AV6 140 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 SPDYE7PQ495Y7 208 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 ANXA8L1Q5VT79 327 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 CYB5R2Q6BCY4 276 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 OGFOD2Q6N063 350 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF619Q8N2I2 560 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 ZIC4Q8N9L1 334 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 POMGNT2Q8NAT1 580 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 VPS37AQ8NEZ2 397 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 EPS8L3Q8TE67 593 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 FAM168AQ92567 244 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 ZG16BQ96DA0 208 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 CCDC115Q96NT0 180 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 CTPS2Q9NRF8 586 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 MKLN1Q9UL63 735 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 WDR45Q9Y484 360 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 PMF1-BGLAPU3KQ54 211 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
CLSTN3-206ENST00000535668 PRAMEF27A3QJZ7 478 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 HMGN4O00479 90 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 NPIPB7O75200 414 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 BCAS1O75363 584 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 RAD51DO75771 328 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 UBTFL6P0CB48 400 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 IGHV4-31P0DP07 118 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 GIFP27352 417 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 GPR68Q15743 365 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 ATAD3BQ5T9A4 648 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC22A25Q6T423 547 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 LRRC74BQ6ZQY2 392 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 TCP10LQ8TDR4 215 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC35B4Q969S0 331 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 ROPN1LQ96C74 230 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 CHMP6Q96FZ7 201 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 C1orf159Q96HA4 380 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 OR51I1Q9H343 314 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 MTHFD2LQ9H903 347 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 SSU72Q9NP77 194 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 GIMAP2Q9UG22 337 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 BTNL2Q9UIR0 455 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 OSGIN1Q9UJX0 560 aa9.81□□□□□ -0.84
CLSTN3-206ENST00000535668 ARPC4-TTLL3A0A0A6YYG9 625 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 RNF103-CHMP3A0A140T963 221 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 LOC390937A0A1W2PQ73 354 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 CIB4A0PJX0 185 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 RPL36A-HNRNPH2H7BZ11 118 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 BIRC5O15392 142 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 IGLV1-44P01699 117 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 FABP6P51161 128 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 P2RY4P51582 365 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 POLR2HP52434 150 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 CLNS1AP54105 237 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 PRPS1P60891 318 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 RPS26P62854 115 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 OR4F3Q6IEY1 312 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 C16orf62Q7Z3J2 963 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ANKRD46Q86W74 232 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF440Q8IYI8 595 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 CLECL1Q8IZS7 167 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ARFGAP2Q8N6H7 521 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 TMCO5AQ8N6Q1 288 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF525Q8N782 197 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ZNF540Q8NDQ6 660 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 ATP6V1C2Q8NEY4 427 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 OR5AK3PQ8NH89 298 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 UBLCP1Q8WVY7 318 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 TUBGCP3Q96CW5 907 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 DDIT4LQ96D03 193 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC35G5Q96KT7 338 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 RHOXF2Q9BQY4 288 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 NAA11Q9BSU3 229 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 C1orf50Q9BV19 199 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 MECRQ9BV79 373 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 KATNB1Q9BVA0 655 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 BEX2Q9BXY8 128 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC38A1Q9H2H9 487 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC7A10Q9NS82 523 aa9.8□□□□□ -0.84
CLSTN3-206ENST00000535668 SLC17A7Q9P2U7 560 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms