RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 INPP5KQ9BT40 448 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TRAF4Q9BUZ4 470 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TMEM109Q9BVC6 243 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 GRIP2Q9C0E4 1043 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 MOV10Q9HCE1 1003 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 THUMPD1Q9NXG2 353 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 P2RX2Q9UBL9 471 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TMED7Q9Y3B3 224 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 OR6C65A6NJZ3 312 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 OVOL3O00110 214 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 RFXANKO14593 260 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 ERCC1P07992 297 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 TTKP33981 857 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC1A3P43003 542 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 CRISP3P54108 245 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 NME5P56597 212 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 UBE2NP61088 152 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 LIN52Q52LA3 116 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 CEP85LQ5SZL2 805 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 SAXO2Q658L1 398 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 ATG16L1Q676U5 607 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 HMBOX1Q6NT76 420 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 WDR93Q6P2C0 686 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 LRRC74BQ6ZQY2 392 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF433Q8N7K0 673 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 CCDC106Q9BWC9 280 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 REPIN1Q9BWE0 567 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
CLSTN3-205ENST00000535452 A0A096LPI6 279 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 A8MV72 311 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 ITM2AO43736 263 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CD5LO43866 347 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 DNAJA2O60884 412 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 RAMP1O60894 148 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 ADAM11O75078 769 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 PGM3O95394 542 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 IL6P05231 212 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 PGRP06401 933 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 VIMP08670 466 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC25A16P16260 332 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 BGNP21810 368 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CD40P25942 277 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 TACR3P29371 465 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CRATP43155 626 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 ETV4P43268 484 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 SLC16A1P53985 500 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CASP8Q14790 479 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 OTUD3Q5T2D3 398 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 FRRS1Q6ZNA5 592 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CADM2Q8N3J6 435 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 FAM71CQ8NEG0 241 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 AENQ8WTP8 325 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 IGFBPL1Q8WX77 278 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 DNAJA3Q96EY1 480 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 CCDC115Q96NT0 180 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 KLHDC3Q9BQ90 382 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 SAP130Q9H0E3 1048 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 RAD21L1Q9H4I0 556 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 SERHL2Q9H4I8 314 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 NKIRAS1Q9NYS0 192 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 RPS6KB2Q9UBS0 482 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 MALT1Q9UDY8 824 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-205ENST00000535452 AGAP5A6NIR3 686 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 C5orf58C9J3I9 102 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 VAMP5O95183 116 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 IGHV4-39P01824 125 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 IDO1P14902 403 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 MPGP29372 298 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 SNRPD2P62316 118 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 WBP2NLQ6ICG8 309 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 OGFOD2Q6N063 350 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 PAQR6Q6TCH4 344 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 MREGQ8N565 214 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 ANKRD42Q8N9B4 389 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 SPATA3Q8NHX4 192 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 FAM168AQ92567 244 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 SF3B5Q9BWJ5 86 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 OR11A1Q9GZK7 315 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 PIF1Q9H611 641 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 MEAF6Q9HAF1 191 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 OBP2BQ9NPH6 170 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 TMEM45AQ9NWC5 275 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 LPAR3Q9UBY5 353 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 B3GALT5Q9Y2C3 310 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 PCNX3Q9H6A9 2034 aa11.67□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF716A6NP11 495 aa11.66□□□□□ -0.54
CLSTN3-205ENST00000535452 RNF212BA8MTL3 300 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms