RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	BTNL3	Q6UXE8	466 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SSX9	Q7RTT3	188 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	VTCN1	Q7Z7D3	282 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SCD5	Q86SK9	330 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	ICA1L	Q8NDH6	482 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SDR9C7	Q8NEX9	313 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	OR4C3	Q8NH37	302 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	FBXO25	Q8TCJ0	367 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	BAD	Q92934	168 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SLCO2A1	Q92959	643 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	ART4	Q93070	314 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	C12orf42	Q96LP6	360 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SLC6A7	Q99884	636 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SH3GL3	Q99963	347 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	RIOK1	Q9BRS2	568 aa	Known RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	TUBGCP2	Q9BSJ2	902 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	PINK1	Q9BXM7	581 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	MRPS30	Q9NP92	439 aa	Known RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	CHRAC1	Q9NRG0	131 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	AHSP	Q9NZD4	102 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SELENOK	Q9Y6D0	94 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	BTAF1	O14981	1849 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	IGHV4-61	A0A0C4DH41	118 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979		A0A0J9YVX5	310 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979		A0A0J9YYE9	177 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SMCO3	A2RU48	225 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RSPH10B2	B2RC85	870 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	HSBP1L1	C9JCN9	74 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979		K7ERQ8	282 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	CYB561D2	O14569	222 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	EI24	O14681	340 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PRKAB2	O43741	272 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OR2F2	O95006	317 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SEC24A	O95486	1093 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	GNA14	O95837	355 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SNAI1	O95863	264 aa	Predicted RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	F10	P00742	488 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	TSHB	P01222	138 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	IGHV4-59	P01825	116 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	TRBC1	P01850	177 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RSPH10B	P0C881	870 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PRSS56	P0CW18	603 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PRKAR1A	P10644	381 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	CCNB1	P14635	433 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	ACADS	P16219	412 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	BDKRB1	P46663	353 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	ZFP36L2	P47974	494 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	DUSP3	P51452	185 aa	Predicted RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	NOVA1	P51513	510 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SLC7A2	P52569	658 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	NDST2	P52849	883 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	ABCE1	P61221	599 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RAB11A	P62491	216 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	MRPS15	P82914	257 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	IL9R	Q01113	521 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	DR1	Q01658	176 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OGDH	Q02218	1023 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OC90	Q02509	493 aa	Predicted RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	CRMP1	Q14194	572 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RAB11B	Q15907	218 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	HNRNPA1L2	Q32P51	320 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	C8orf74	Q6P047	294 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	LINC00523	Q86TU6	105 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SERPINA9	Q86WD7	417 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SLC22A15	Q8IZD6	547 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	MARVELD2	Q8N4S9	558 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OR7G2	Q8NG99	324 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OR10A7	Q8NGE5	316 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	CCDC26	Q8TAB7	109 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	HCAR2	Q8TDS4	363 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	FCAMR	Q8WWV6	532 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	OR1E3	Q8WZA6	343 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	NRGN	Q92686	78 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	C2orf48	Q96LS8	159 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	NSMCE3	Q96MG7	304 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	TMEM121	Q9BTD3	319 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	DPH7	Q9BTV6	452 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	C20orf24	Q9BUV8	137 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	MTHFD2L	Q9H903	347 aa	Predicted RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PANK3	Q9H999	370 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	SIGLEC8	Q9NYZ4	499 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	IL36G	Q9NZH8	169 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF221	Q9UK13	617 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PITPNC1	Q9UKF7	332 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	IKZF2	Q9UKS7	526 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	PRPF19	Q9UMS4	504 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RASD1	Q9Y272	281 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	RHBDD3	Q9Y3P4	386 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	MMP24	Q9Y5R2	645 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	GMEB1	Q9Y692	573 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	COL2A1	P02458	1487 aa	Predicted RBP	3.91	□□□□□ -1.78
ATM-223	ENST00000533979	MYO3B	Q8WXR4	1341 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	TUBGCP6	Q96RT7	1819 aa		3.91	□□□□□ -1.78
ATM-223	ENST00000533979	UNC80	Q8N2C7	3258 aa		3.9	□□□□□ -1.78
ATM-223	ENST00000533979	LY75	O60449	1722 aa		3.9	□□□□□ -1.78
ATM-223	ENST00000533979	KDM6A	O15550	1401 aa	Predicted RBP	3.9	□□□□□ -1.78
ATM-223	ENST00000533979	IGKV3D-15	A0A087WSY6	115 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms