RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RBMS2Q15434 407 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TATDN3Q17R31 274 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SBSNQ6UWP8 590 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RETREG3Q86VR2 466 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF454Q8N9F8 522 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.364e-7■■□□□ 12.3
CTNND1-236ENST00000533667 FAM71F1Q96KD3 344 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR5B2Q96R09 309 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM38AQ9H6F2 299 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 A4GALTQ9NPC4 353 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GOLGA4Q13439 2230 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 A0A0A6YYC8 382 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 PRSS38A1L453 326 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 C7orf72A4D263 438 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FAM155AB1AL88 458 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 I3L1I5 382 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 PPP6CO00743 305 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FRS3O43559 492 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ACTL6BO94805 426 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CNOT4O95628 575 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 F3P13726 295 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 XCR1P46094 333 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ATP1B3P54709 279 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CXADRP78310 365 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ADARB1P78563 741 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 NFATC4Q14934 902 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF542PQ5EBM4 170 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 NXNL2Q5VZ03 156 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FCRLBQ6BAA4 426 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 MBOAT2Q6ZWT7 520 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR4M1Q8NGD0 313 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 AKR7LQ8NHP1 331 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GCDHQ92947 438 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TOMM40LQ969M1 308 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CD300AQ9UGN4 299 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 MCTS1Q9ULC4 181 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ATXN7L1Q9ULK2 861 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 UGT2A1Q9Y4X1 527 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RGPD1P0DJD0 1748 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 LOC105369274A0A096LPK9 316 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TCRBV5S1A1TA0A578 114 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR52A4PA6NMU1 304 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 CD300LBA8K4G0 201 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 B4DXG7 233 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SGK494L7N484 410 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR7A17O14581 309 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TOR1AO14656 332 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF254O75437 659 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 EFNA3P52797 238 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TNFRSF17Q02223 184 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DEFB110Q30KQ9 67 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 BCL7AQ4VC05 210 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 FAM199XQ6PEV8 388 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SLC46A3Q7Z3Q1 461 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR4N4Q8N0Y3 316 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 PELI3Q8N2H9 469 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 ANKLE1Q8NAG6 615 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM185AQ8NFB2 350 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR14A16Q8NHC5 309 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DOK4Q8TEW6 326 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 HCAR1Q9BXC0 346 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SLC25A18Q9H1K4 315 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 EGLN3Q9H6Z9 239 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 C19orf12Q9NSK7 152 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SEMA4GQ9NTN9 838 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 RBFOX1Q9NWB1 397 aaKnown RBP6.54□□□□□ -1.36
CTNND1-236ENST00000533667 ARHGAP33O14559 1287 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DVL2O14641 736 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 ACOT8O14734 319 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 CACNG3O60359 315 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DPM1O60762 260 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM127O75204 238 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 BMP4P12644 408 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 HOXD9P28356 352 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-236ENST00000533667 DAPP51397 102 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 HSD17B7P56937 341 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 TGFBR3Q03167 851 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR7A5Q15622 319 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SYPL1Q16563 259 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 ARSJQ5FYB0 599 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-236ENST00000533667 PAQR9Q6ZVX9 377 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 VRK2Q86Y07 508 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 SVBPQ8N300 66 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 EID2Q8N6I1 236 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 IL17RDQ8NFM7 739 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR51D1Q8NGF3 324 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR6T1Q8NGN1 323 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 OR6F1Q8NGZ6 308 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 STK35Q8TDR2 534 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 BORCS7Q96B45 105 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 EGLN2Q96KS0 407 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 FCRL1Q96LA6 429 aa6.54□□□□□ -1.36
CTNND1-236ENST00000533667 CLSTN3Q9BQT9 956 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms