RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 RNF185Q96GF1 192 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 SH3YL1Q96HL8 342 aaPredicted RBP1.62□□□□□ -2.15
ATM-220ENST00000533526 TSG101Q99816 390 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 P2RY13Q9BPV8 354 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 ZNF670Q9BS34 389 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 NIPSNAP3BQ9BS92 247 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 ROGDIQ9GZN7 287 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 NXF5Q9H1B4 397 aaKnown RBP1.62□□□□□ -2.15
ATM-220ENST00000533526 RWDD1Q9H446 243 aaPredicted RBP1.62□□□□□ -2.15
ATM-220ENST00000533526 SUDS3Q9H7L9 328 aaPredicted RBP1.62□□□□□ -2.15
ATM-220ENST00000533526 AATFQ9NY61 560 aaKnown RBP eCLIP1.62□□□□□ -2.15
ATM-220ENST00000533526 ODF2LQ9ULJ1 636 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 MFHAS1Q9Y4C4 1052 aa1.62□□□□□ -2.15
ATM-220ENST00000533526 ARHGAP21Q5T5U3 1957 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 PPIAL4EA0A075B759 164 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 IGHV1OR21-1A0A087WYE8 117 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 A0A0G2JN53 185 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 A6NIZ1 184 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TCP11X1B4DZS4 312 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 PPIAL4DF5H284 164 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 HIP1O00291 1037 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 OR1F1O43749 312 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 LANCL1O43813 399 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 CXCL13O43927 109 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TPST2O60704 377 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 KIAA0754O94854 1291 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 LRATO95237 230 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 CA1P00915 261 aaPredicted RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 PPIAL4FP0DN26 164 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 POLR2EP19388 210 aaKnown RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 ATP6V1B2P21281 511 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 NT5EP21589 574 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 CALCRP30988 508 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 PTGDSP41222 190 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TDO2P48775 406 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 ARRB1P49407 418 aaPredicted RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 CCR6P51684 374 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 DLX1P56177 255 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 RAP1BP61224 184 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 CCDC57Q2TAC2 916 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 BOLA3Q53S33 107 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TIGD3Q6B0B8 471 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 LRRC31Q6UY01 552 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 ZNF571Q7Z3V5 609 aaPredicted RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 CAMK2N1Q7Z7J9 78 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 MOB3BQ86TA1 216 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 C6orf223Q8N319 242 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 ATP6V0D2Q8N8Y2 350 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 ZNF540Q8NDQ6 660 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 CCDC110Q8TBZ0 833 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 RAET1EQ8TD07 263 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 NDRG1Q92597 394 aaKnown RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 RPUSD4Q96CM3 377 aaKnown RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 SCRT1Q9BWW7 348 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 GPR61Q9BZJ8 451 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TMEM117Q9H0C3 514 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 VCPKMTQ9H867 229 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 POLE3Q9NRF9 147 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 NECAP2Q9NVZ3 263 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 SMPD3Q9NY59 655 aaPredicted RBP1.61□□□□□ -2.15
ATM-220ENST00000533526 ACTR3BQ9P1U1 418 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 TBX21Q9UL17 535 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 COPS3Q9UNS2 423 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 RASD1Q9Y272 281 aa1.61□□□□□ -2.15
ATM-220ENST00000533526 PLEKHH1Q9ULM0 1364 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 A0A096LNJ9 63 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 A0A1B0GUS0 222 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 LRCOL1A6NCL2 159 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 TRDCB7Z8K6 153 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 E9PBE3 544 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 G3V4G9 280 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 DCTN6O00399 190 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 AGPAT2O15120 278 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 AIREO43918 545 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 SPAG7O75391 227 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 PLEKP08567 350 aaPredicted RBP1.6□□□□□ -2.15
ATM-220ENST00000533526 TDGF1P13385 188 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 HPGDP15428 266 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 ZNF44P15621 663 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 COX5AP20674 150 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 HOXA9P31269 272 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 HPCAL1P37235 193 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 KLK7P49862 253 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 TDGF1P3P51864 188 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 HSPA2P54652 639 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 KRTAP10-1P60331 282 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 ZNF763Q0D2J5 394 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 PTGES3Q15185 160 aaKnown RBP1.6□□□□□ -2.15
ATM-220ENST00000533526 ATP6AP1Q15904 470 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 CDC37Q16543 378 aaPredicted RBP1.6□□□□□ -2.15
ATM-220ENST00000533526 TPD52L1Q16890 204 aaPredicted RBP1.6□□□□□ -2.15
ATM-220ENST00000533526 PARP15Q460N3 678 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 PIGGQ5H8A4 983 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 TMEM255AQ5JRV8 349 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 SAMD4BQ5PRF9 694 aaKnown RBP1.6□□□□□ -2.15
ATM-220ENST00000533526 FAM71E1Q6IPT2 247 aa1.6□□□□□ -2.15
ATM-220ENST00000533526 BLOC1S2Q6QNY1 142 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms