RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TSTQ16762 297 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 EMC4Q5J8M3 183 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 NIPAL1Q6NVV3 410 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PODNL1Q6PEZ8 512 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 EGFL6Q8IUX8 553 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CCDC116Q8IYX3 515 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CADM3Q8N126 398 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 RPRMLQ8N4K4 120 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 TBC1D19Q8N5T2 526 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 KCT2Q8NC54 265 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PSD4Q8NDX1 1056 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 NFAM1Q8NET5 270 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 MS4A6EQ96DS6 147 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ZBED6CLQ96FA7 236 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 RBCK1Q9BYM8 510 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 C6orf62Q9GZU0 229 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PCBD2Q9H0N5 130 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SLC25A19Q9HC21 320 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SLC35C2Q9NQQ7 365 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PRDM7Q9NQW5 492 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ACAD8Q9UKU7 415 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ASB4Q9Y574 426 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 GPC6Q9Y625 555 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ARRDC5A6NEK1 342 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DNAJB6O75190 326 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GPX5O75715 221 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CDC123O75794 336 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 HMGN2P05204 90 aaKnown RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 H1F0P07305 194 aaKnown RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 OSMP13725 252 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GRK3P35626 688 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 RFC3P40938 356 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TGM4P49221 684 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DLX5P56178 289 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CDC42P60953 191 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SKP1P63208 163 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DBPQ10586 325 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SLAMF1Q13291 335 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 LTB4RQ15722 352 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CEBPEQ15744 281 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF404Q494X3 552 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 FLYWCH1Q4VC44 716 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TMEM107Q6UX40 140 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ZER1Q7Z7L7 766 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ACOT4Q8N9L9 421 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 MFSD9Q8NBP5 474 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 MBD6Q96DN6 1003 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 OPALINQ96PE5 141 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 MGLLQ99685 303 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 MAPKAP1Q9BPZ7 522 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TAPBPLQ9BX59 468 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CDCA4Q9BXL8 241 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DEFB126Q9BYW3 111 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PLA2G12AQ9BZM1 189 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 HHATLQ9HCP6 504 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TAS2R7Q9NYW3 318 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 FBXW2Q9UKT8 454 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GPR55Q9Y2T6 319 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 LSM2Q9Y333 95 aaKnown RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CHST2Q9Y4C5 530 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 NAV3Q8IVL0 2385 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 H3BN98 237 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TBX1O43435 398 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PROM1O43490 865 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PRKYO43930 277 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 CLEC3AO75596 197 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 APOL3O95236 402 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 AIFM1O95831 613 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ADAP00813 363 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 NR2F1P10589 423 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PORP16435 677 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TNNI3P19429 210 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PTNP21246 168 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 HIST1H1TP22492 207 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GTF2E2P29084 291 aaKnown RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GPC1P35052 558 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 UGT2B10P36537 528 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 HOXC5Q00444 222 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TEKQ02763 1124 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SLC25A35Q3KQZ1 300 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DCST1Q5T197 706 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SLX4IPQ5VYV7 408 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 C12orf73Q69YU5 71 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 MRM1Q6IN84 353 aaKnown RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ABHD17CQ6PCB6 329 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 QSOX2Q6ZRP7 698 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 BIVMQ86UB2 503 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SLC22A16Q86VW1 577 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 GPALPP1Q8IXQ4 340 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 TCEANCQ8N8B7 351 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 OR5T3Q8NGG3 340 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 OR5M3Q8NGP4 307 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 S100ZQ8WXG8 99 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 PPP1R14BQ96C90 147 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 SLC35G5Q96KT7 338 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 DEFB127Q9H1M4 99 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 NT5DC2Q9H857 520 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms