RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 GTF2IRD2BQ6EKJ0 949 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CASP12Q6UXS9 341 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 RASSF6Q6ZTQ3 369 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 BCDIN3DQ7Z5W3 292 aaKnown RBP16.82■□□□□ 0.28
SMPD1-208ENST00000533123 GTF2IRD2Q86UP8 949 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 DND1Q8IYX4 353 aaKnown RBP16.82■□□□□ 0.28
SMPD1-208ENST00000533123 TCEANCQ8N8B7 351 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 FAM71CQ8NEG0 241 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 RNF138Q8WVD3 245 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 GGHQ92820 318 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CPNE5Q9HCH3 593 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 IL20RAQ9UHF4 553 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 PRKYO43930 277 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 INMTO95050 263 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 FADS2O95864 444 aaKnown RBP16.82■□□□□ 0.28
SMPD1-208ENST00000533123 WDPCPO95876 746 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 MAKP20794 623 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ITPKBP27987 946 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CD96P40200 585 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CCR4P51679 360 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF117Q03924 483 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 SKP2Q13309 424 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ZSWIM7Q19AV6 140 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 SPINK14Q6IE38 97 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF550Q7Z398 422 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF227Q86WZ6 799 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 TMCO5AQ8N6Q1 288 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 OR13F1Q8NGS4 319 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 TEX47Q8TBZ9 253 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 PAQR8Q8TEZ7 354 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 SGCZQ96LD1 299 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 KLHDC3Q9BQ90 382 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 COPS4Q9BT78 406 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 PLCXD1Q9NUJ7 323 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 DNAJC27Q9NZQ0 273 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 ABI3Q9P2A4 366 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 CPAMD8Q8IZJ3 1885 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 PTPRQQ9UMZ3 2332 aa16.82■□□□□ 0.28
SMPD1-208ENST00000533123 GNB5O14775 395 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CHP2O43745 196 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 ENTPD6O75354 484 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 IFI30P13284 250 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 C21orf33P30042 268 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 GAS1P54826 345 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CSNK2BP67870 215 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 TEKQ02763 1124 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 ALG10BQ5I7T1 473 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 GPR107Q5VW38 600 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 SLC22A10Q63ZE4 541 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CROCCP3Q8IVE0 287 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 LSMEM1Q8N8F7 131 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 FAR1Q8WVX9 515 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 IPCEF1Q8WWN9 437 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 SIGLEC11Q96RL6 698 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 TRIM2Q9C040 744 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 NAA50Q9GZZ1 169 aaKnown RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 EVA1AQ9H8M9 152 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 SH2D2AQ9NP31 389 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 MEPEQ9NQ76 525 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 LRFN1Q9P244 771 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CLCA1A8K7I4 914 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 G3V3Y1 287 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 MPZL2O60487 215 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 TUBA3CQ13748 450 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 INPP5JQ15735 1006 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 TUBA3EQ6PEY2 450 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF620Q6ZNG0 422 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 RTL4Q6ZR62 310 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 MUL1Q969V5 352 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 UTP23Q9BRU9 249 aaKnown RBP16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CCNB1IP1Q9NPC3 277 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 FKBP14Q9NWM8 211 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 CLN6Q9NWW5 311 aa16.81■□□□□ 0.28
SMPD1-208ENST00000533123 ZZEF1O43149 2961 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 B4DXG7 233 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SEC14L2O76054 403 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 ENTPD1P49961 510 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SMSP52788 366 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 MLLT10P55197 1068 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SNRPGP62308 76 aaKnown RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 C17orf67Q0P5P2 114 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SLC30A6Q6NXT4 461 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SLC27A4Q6P1M0 643 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 PRSS48Q7RTY5 328 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SLC35B4Q969S0 331 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 ISOC1Q96CN7 298 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 SECISBP2Q96T21 854 aaKnown RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 TUBA1CQ9BQE3 449 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 LAT2Q9GZY6 243 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 PLGRKTQ9HBL7 147 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 RYDENQ9NUL5 291 aaKnown RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 TBC1D23Q9NUY8 699 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 TLX2O43763 284 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 CASRP41180 1078 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 PCYT1AP49585 367 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 GP2P55259 537 aaKnown RBP16.8■□□□□ 0.28
SMPD1-208ENST00000533123 LRRC69Q6ZNQ3 347 aa16.8■□□□□ 0.28
SMPD1-208ENST00000533123 OR4Q3Q8NH05 313 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms