RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	RNF165	Q6ZSG1	346 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	SZRD1	Q7Z422	152 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZAR1	Q86SH2	424 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	UBE2J2	Q8N2K1	259 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	SLC16A11	Q8NCK7	471 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	NUP43	Q8NFH3	380 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	MUS81	Q96NY9	551 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	STAC	Q99469	402 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	KLHDC3	Q9BQ90	382 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	BTBD2	Q9BX70	525 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	C1orf21	Q9H246	121 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	DUSP22	Q9NRW4	184 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079	TAGLN3	Q9UI15	199 aa		10.89	□□□□□ -0.67
CAPN1-223	ENST00000533079		A0A1W2PNR3	127 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	SDHD	O14521	159 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	AZIN1	O14977	448 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	RSL1D1	O76021	490 aa	Known RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	PDE5A	O76074	875 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	TACSTD2	P09758	323 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	UROS	P10746	265 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	NQO1	P15559	274 aa	Known RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	EGR1	P18146	543 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ATP6V1C1	P21283	382 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	FRK	P42685	505 aa	Predicted RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ACTG1	P63261	375 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	POU6F2	P78424	691 aa	Predicted RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	BTK	Q06187	659 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	CBFB	Q13951	182 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	GABRA6	Q16445	453 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	IMPG1	Q17R60	797 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZSWIM7	Q19AV6	140 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	LSM12	Q3MHD2	195 aa	Known RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	EXOSC6	Q5RKV6	272 aa	Known RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	MALRD1	Q5VYJ5	2156 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	KANK2	Q63ZY3	851 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	CBLN3	Q6UW01	205 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZNF551	Q7Z340	670 aa	Predicted RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	C3orf56	Q8N813	242 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	LINC01356	Q8N9X3	169 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	TOR1AIP2	Q8NFQ8	470 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	FBXO30	Q8TB52	745 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	GPR119	Q8TDV5	335 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	CMTM5	Q96DZ9	223 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	FOXN4	Q96NZ1	517 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	OR5B2	Q96R09	309 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	BTBD10	Q9BSF8	475 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	RASSF4	Q9H2L5	321 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZNF385D	Q9H6B1	395 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	ARL8B	Q9NVJ2	186 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	TMEM45A	Q9NWC5	275 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	METRN	Q9UJH8	293 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	PRDM4	Q9UKN5	801 aa		10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	NOSIP	Q9Y314	301 aa	Known RBP	10.88	□□□□□ -0.67
CAPN1-223	ENST00000533079	FAM157A	C9JC47	383 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ANKRD65	E5RJM6	399 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	DNPH1	O43598	174 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	TBX19	O60806	448 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ERCC1	P07992	297 aa	Predicted RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	PAX7	P23759	505 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	GIF	P27352	417 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	MRPL19	P49406	292 aa	Known RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	DIO1	P49895	249 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	PPOX	P50336	477 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ATP4B	P51164	291 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	PRKAG1	P54619	331 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	TGFBR3	Q03167	851 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	MLC1	Q15049	377 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	CARTPT	Q16568	116 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	MST1L	Q2TV78	715 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	KLHL26	Q53HC5	615 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	FAM219B	Q5XKK7	198 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	SLC46A3	Q7Z3Q1	461 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	TREML1	Q86YW5	311 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ATP6V1C2	Q8NEY4	427 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	OR5W2	Q8NH69	310 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	PIGX	Q8TBF5	258 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ST8SIA1	Q92185	356 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	FBXO17	Q96EF6	278 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZHX1-C8orf76	Q96EF9	292 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	OR52B2	Q96RD2	323 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	SOX7	Q9BT81	388 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	NUF2	Q9BZD4	464 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	SAP130	Q9H0E3	1048 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	MID1IP1	Q9NPA3	183 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	SERINC1	Q9NRX5	453 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	CARD8	Q9Y2G2	431 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	POLR3H	Q9Y535	204 aa	Predicted RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	PCDHB14	Q9Y5E9	798 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	SPIN1	Q9Y657	262 aa	Predicted RBP	10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	CAPN7	Q9Y6W3	813 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079	FREM1	Q5H8C1	2179 aa		10.87	□□□□□ -0.67
CAPN1-223	ENST00000533079		A0A1W2PR80	420 aa		10.86	□□□□□ -0.67
CAPN1-223	ENST00000533079	ZNF716	A6NP11	495 aa		10.86	□□□□□ -0.67
CAPN1-223	ENST00000533079		B9A039	149 aa		10.86	□□□□□ -0.67
CAPN1-223	ENST00000533079	ATP6V1G2-DDX39B	F2Z307	99 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms