RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 KLF10Q13118 480 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 SELPLGQ14242 412 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 WBP2NLQ6ICG8 309 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 NUFIP2Q7Z417 695 aaKnown RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 MTDHQ86UE4 582 aaKnown RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 CDH24Q86UP0 819 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 STK32CQ86UX6 486 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 LSRQ86X29 649 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 ANKS4BQ8N8V4 417 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 DDIT4LQ96D03 193 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 ZHX1-C8orf76Q96EF9 292 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 TACO1Q9BSH4 297 aaKnown RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 SPATA5L1Q9BVQ7 753 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-210ENST00000532935 BCO1Q9HAY6 547 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 CELSR1Q9NYQ6 3014 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
CPSF1-210ENST00000532935 EBAG9O00559 213 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 FRS3O43559 492 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 GOSR1O95249 250 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 CXCR1P25024 350 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 OR2B6P58173 313 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 CAPRIN1Q14444 709 aaKnown RBP13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ZSCAN26Q16670 478 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 CYP51A1Q16850 503 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 TRMT5Q32P41 509 aaKnown RBP13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ABLIM2Q6H8Q1 611 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 WFIKKN1Q96NZ8 548 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF300Q96RE9 604 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF607Q96SK3 696 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 FANCFQ9NPI8 374 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ANGPT4Q9Y264 503 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 TRAPPC4Q9Y296 219 aa13.67□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF724A8MTY0 619 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 CASKO14936 926 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 IMPDH2P12268 514 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 AQP1P29972 269 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 HOXC5Q00444 222 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 RBBP4Q09028 425 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 MAPRE2Q15555 327 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 FBXW10Q5XX13 1052 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 TFAP2EQ6VUC0 442 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 STAC2Q6ZMT1 411 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 COMTD1Q86VU5 262 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 CDC20BQ86Y33 519 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 NRGNQ92686 78 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 C3orf49Q96BT1 292 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 KAT8Q9H7Z6 458 aaKnown RBP13.66□□□□□ -0.22
CPSF1-210ENST00000532935 PRR14LQ5THK1 2151 aa13.66□□□□□ -0.22
CPSF1-210ENST00000532935 PRORSD1PA6NEY8 169 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ENO4A6NNW6 628 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 SNX3O60493 162 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 TPST1O60507 370 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 SERPINB7O75635 380 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ADSLP30566 484 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 SLC35A1P78382 337 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 BNIP2Q12982 314 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 PDK3Q15120 406 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 MMEL1Q495T6 779 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ANKRD34AQ69YU3 496 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 NANOGP8Q6NSW7 305 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 NET1Q7Z628 596 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ATG4DQ86TL0 474 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 SNX32Q86XE0 403 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 CCDC197Q8NCU1 140 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 PIGXQ8TBF5 258 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-210ENST00000532935 POTEKPQ9BYX7 375 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 NANOGQ9H9S0 305 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF226Q9NYT6 803 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 EMC3Q9P0I2 261 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
CPSF1-210ENST00000532935 IGKV3D-15A0A087WSY6 115 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 ZNF716A6NP11 495 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 A8MVM7 634 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 ZNF814B7Z6K7 855 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 FXYD1O00168 92 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 MRASO14807 208 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 EIF1BO60739 113 aaKnown RBP13.64□□□□□ -0.23
CPSF1-210ENST00000532935 KRT34O76011 436 aa13.64□□□□□ -0.23
CPSF1-210ENST00000532935 HRGP04196 525 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms