RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 PLPP6Q8IY26 295 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 IL17RDQ8NFM7 739 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 IFI44Q8TCB0 444 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 RHBDD3Q9Y3P4 386 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 RAB3DO95716 219 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 S100A7P31151 101 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 GPR176Q14439 515 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 BCL7AQ4VC05 210 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 KIAA1211LQ6NV74 962 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 OR56B2PQ8NGI1 322 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 CCDC74AQ96AQ1 378 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 NICN1Q9BSH3 213 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 POM121BA6NF01 834 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 DDAH2O95865 285 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ALDOBP05062 364 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 MAN2C1Q9NTJ4 1040 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 KNG1P01042 644 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ARSBP15848 533 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 TACR1P25103 407 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 DPP4P27487 766 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 NKPD1Q17RQ9 610 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC5A12Q1EHB4 618 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 SFRP4Q6FHJ7 346 aaPredicted RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 WDSUB1Q8N9V3 476 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC19A3Q9BZV2 496 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 UBQLN2Q9UHD9 624 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 FUOMA2VDF0 154 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 B4GALT3O60512 393 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 OLIG3Q7RTU3 272 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 BIRC8Q96P09 236 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 EIF5A2Q9GZV4 153 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ERVK13-1Q9NX77 482 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 TBC1D29Q9UFV1 150 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 EBF1Q9UH73 591 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 NOSIPQ9Y314 301 aaKnown RBP13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 MTHFD2P13995 350 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 HTR5AP47898 357 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC36A2Q495M3 483 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 MRPL2Q5T653 305 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC41A2Q96JW4 573 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CORINQ9Y5Q5 1042 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 B3GALT1Q9Y5Z6 326 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CXCL10P02778 98 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 F13BP05160 661 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 PODNL1Q6PEZ8 512 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 MEPCEQ7L2J0 689 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 TEX19Q8NA77 164 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 OR7G1Q8NGA0 311 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 DUSP19Q8WTR2 217 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SYNPO2LQ9H987 977 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 FGF22Q9HCT0 170 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 PRDM9Q9NQV7 894 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CNOT2Q9NZN8 540 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF736B4DX44 427 aaPredicted RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC35E2P0CK97 266 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 IL2RGP31785 369 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CXCR4P61073 352 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF616Q08AN1 781 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 AKR1C8PQ5T2L2 129 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 HENMT1Q5T8I9 393 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 ASRGL1Q7L266 308 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SEC61A1P61619 476 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 MEF2DQ14814 521 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SLCO4C1Q6ZQN7 724 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CCL4L1Q8NHW4 92 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC37A2Q8TED4 501 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 FAM53CQ9NYF3 392 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A1B0GX78 115 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 FAM183AA6NL82 134 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CD300LBA8K4G0 201 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SURF4O15260 269 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SUSD5O60279 629 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CTNSO60931 367 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SEMA3BQ13214 749 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CDK5R2Q13319 367 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 PDE7AQ13946 482 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 MPEG1Q2M385 716 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 SPRED3Q2MJR0 410 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 CFAP77Q6ZQR2 320 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms