RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TRNT1Q96Q11 434 aaKnown RBP16.8■□□□□ 0.28
SSH3-209ENST00000532600 SMR3AQ99954 134 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 PRSS50Q9UI38 385 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 SLC35A3Q9Y2D2 325 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 GMEB1Q9Y692 573 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 ARID1AO14497 2285 aa16.8■□□□□ 0.28
SSH3-209ENST00000532600 AGAP5A6NIR3 686 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 MRASO14807 208 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 ADAP00813 363 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 FESP07332 822 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 FOSL1P15407 271 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 RPS4Y1P22090 263 aaKnown RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 RASGEF1BQ0VAM2 473 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 RGNQ15493 299 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 MAPRE2Q15555 327 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 SYT14P1Q58G82 188 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 COQ5Q5HYK3 327 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 SFRP5Q5T4F7 317 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 GKAP1Q5VSY0 366 aaPredicted RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 ZNF704Q6ZNC4 412 aaPredicted RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 ADGRG3Q86Y34 549 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 RP9Q8TA86 221 aaKnown RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 TMEM234Q8WY98 164 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 DNAJA3Q96EY1 480 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 CGREF1Q99674 301 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 CCL19Q99731 98 aa16.79■□□□□ 0.28
SSH3-209ENST00000532600 EXOSC3Q9NQT5 275 aaKnown RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
SSH3-209ENST00000532600 BBIP1A8MTZ0 92 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 HOXB4P17483 251 aaPredicted RBP16.78■□□□□ 0.28
SSH3-209ENST00000532600 NTF4P34130 210 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 CRATP43155 626 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 OR3A2P47893 321 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 MTPNP58546 118 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 TAB1Q15750 504 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 TRMT5Q32P41 509 aaKnown RBP16.78■□□□□ 0.28
SSH3-209ENST00000532600 Q5PR19 223 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 ABLIM2Q6H8Q1 611 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 C20orf204Q6ZNR8 217 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 LRRC74BQ6ZQY2 392 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 LRRC75A-AS1Q8N1F1 130 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 CCDC197Q8NCU1 140 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 LILRB1Q8NHL6 650 aaPredicted RBP16.78■□□□□ 0.28
SSH3-209ENST00000532600 PIGTQ969N2 578 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 ANKRD27Q96NW4 1050 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 OR11A1Q9GZK7 315 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.78■□□□□ 0.28
SSH3-209ENST00000532600 KLHL9Q9P2J3 617 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 CHRNA9Q9UGM1 479 aa16.78■□□□□ 0.28
SSH3-209ENST00000532600 ZNF716A6NP11 495 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 ZNF724A8MTY0 619 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 RAMP1O60894 148 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 SMPD2O60906 423 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 BMP2P12643 396 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 FPR1P21462 350 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 APOBEC1P41238 236 aaKnown RBP16.77■□□□□ 0.28
SSH3-209ENST00000532600 SHEQ5VZ18 495 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 FAM91A1Q658Y4 838 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 GRINAQ7Z429 371 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 FITM2Q8N6M3 262 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 STEAP2Q8NFT2 490 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 ZNF563Q8TA94 476 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 BCAS4Q8TDM0 211 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 LRRC58Q96CX6 371 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 SERINC1Q9NRX5 453 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 ARL8BQ9NVJ2 186 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 LIPT1Q9Y234 373 aa16.77■□□□□ 0.28
SSH3-209ENST00000532600 DSPPQ9NZW4 1301 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 SULT2B1O00204 365 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 NDUFAB1O14561 156 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 TFPTP0C1Z6 253 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 MAGEA8P43361 318 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 IDH2P48735 452 aaKnown RBP16.76■□□□□ 0.27
SSH3-209ENST00000532600 DSTNP60981 165 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 HPCAP84074 193 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 ADRM1Q16186 407 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 MMEL1Q495T6 779 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 Q6ZT83 130 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 CIARTQ8N365 385 aaPredicted RBP16.76■□□□□ 0.27
SSH3-209ENST00000532600 SLC25A43Q8WUT9 341 aaPredicted RBP16.76■□□□□ 0.27
SSH3-209ENST00000532600 MAL2Q969L2 176 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 C18orf12Q96KH6 178 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 LRRC37BQ96QE4 947 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 TACO1Q9BSH4 297 aaKnown RBP16.76■□□□□ 0.27
SSH3-209ENST00000532600 HDHD5Q9BXW7 423 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 FANCFQ9NPI8 374 aa16.76■□□□□ 0.27
SSH3-209ENST00000532600 NSD1Q96L73 2696 aaPredicted RBP16.76■□□□□ 0.27
SSH3-209ENST00000532600 IGKV3D-15A0A087WSY6 115 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 TMEM72A0PK05 275 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 AIM2O14862 343 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 DCTN3O75935 186 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 PMS2P2O95744 297 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 TFPIP10646 304 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 GPX2P18283 190 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 CCNA2P20248 432 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 IGHV1-2P23083 117 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 PRDX6P30041 224 aa16.75■□□□□ 0.27
SSH3-209ENST00000532600 GZMMP51124 257 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms