RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZNF565Q8N9K5 539 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 CNOT9Q92600 299 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 GHSRQ92847 366 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC35A4Q96G79 324 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC6A18Q96N87 628 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 C7orf50Q9BRJ6 194 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 CHST8Q9H2A9 424 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 FN3KQ9H479 309 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 TSPAN4O14817 238 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 NCR1O76036 304 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 THBS1P07996 1170 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 TACR3P29371 465 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 AQP2P41181 271 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 RIPPLY1Q0D2K3 151 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 HBMQ6B0K9 141 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 NOXA1Q86UR1 476 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 NANOGP1Q8N7R0 232 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 MRGPRX3Q96LB0 322 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 ALG12Q9BV10 488 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 MCOLN1Q9GZU1 580 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 HHLA2Q9UM44 414 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 ZSCAN5BA6NJL1 495 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 HCRTR1O43613 425 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SNRPD2P62316 118 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 VAMP2P63027 116 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SIRPAP78324 504 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 AGAP7PQ5VUJ5 663 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 METTL11BQ5VVY1 283 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 IL20RBQ6UXL0 311 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 GPR137CQ8N3F9 429 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 PATE1Q8WXA2 126 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 CCDC120Q96HB5 630 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC46A1Q96NT5 459 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 MNTQ99583 582 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SYT4Q9H2B2 425 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 DHCR7Q9UBM7 475 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 ZNF281Q9Y2X9 895 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 TRDV1A0A1B0GX56 115 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM129A0AVI4 362 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 SCGB1D2O95969 90 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 CHRM4P08173 479 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 OR8G3PP0DMU2 310 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 AMY2BP19961 511 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 OTX2P32243 289 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 PBX2P40425 430 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 HNRNPFP52597 415 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 PPP2CBP62714 309 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 PPP2CAP67775 309 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM215Q68D42 235 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 OR5M10Q6IEU7 315 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 MED25Q71SY5 747 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 OR5T2Q8NGG2 359 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 RSC1A1Q92681 617 aa14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 LCORQ96JN0 433 aaPredicted RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 PPIL3Q9H2H8 161 aaKnown RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 C6orf106Q9H6K1 298 aaPredicted RBP14.2□□□□□ -0.14
PCDHA3-202ENST00000532566 KCNE1BA0A087WTH5 132 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 PIP5K1CO60331 668 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 IGFBP1P08833 259 aaPredicted RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 TATDN3Q17R31 274 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM196Q5HYL7 178 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM244Q5VVB8 128 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 HACD4Q5VWC8 232 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 ACSM5Q6NUN0 579 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 USP51Q70EK9 711 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 IL22RA1Q8N6P7 574 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FAM83FQ8NEG4 500 aaPredicted RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 OR7G2Q8NG99 324 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 SYNPRQ8TBG9 265 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 NEDD4LQ96PU5 975 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 MMACHCQ9Y4U1 282 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 PLXNB2O15031 1838 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 GALR3O60755 368 aaPredicted RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 PRAF2O60831 178 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 ZFAND5O76080 213 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FOSL2P15408 326 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 TIAL1Q01085 375 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 DEFA5Q01523 94 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 BEST3Q8N1M1 668 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FTMTQ8N4E7 242 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FBXL6Q8N531 539 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 SIMC1Q8NDZ2 872 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 DPCDQ9BVM2 203 aaPredicted RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 MOKQ9UQ07 419 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM72A0PK05 275 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 CDHR4A6H8M9 788 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 ARRDC5A6NEK1 342 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 PLRG1O43660 514 aaKnown RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FCMRO60667 390 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 SCGNO76038 276 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 S100A6P06703 90 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 MTNR1BP49286 362 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 ARHGAP11BQ3KRB8 267 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FAM69AQ5T7M9 428 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 AWAT2Q6E213 333 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 RAB12Q6IQ22 244 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 BRIX1Q8TDN6 353 aaKnown RBP14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 NMNAT3Q96T66 252 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 FGF21Q9NSA1 209 aa14.19□□□□□ -0.14
PCDHA3-202ENST00000532566 KCNIP3Q9Y2W7 256 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms