RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ARMC8Q8IUR7 673 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 OR6K3Q8NGY3 331 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 ROBO4Q8WZ75 1007 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 DDIT4LQ96D03 193 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 ECSITQ9BQ95 431 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 EVA1AQ9H8M9 152 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 GP6Q9HCN6 339 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 HDGFL3Q9Y3E1 203 aa13.44□□□□□ -0.26
CPSF1-208ENST00000532560 TMEM72A0PK05 275 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 A8MXE2 369 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 SULT2B1O00204 365 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 FRS3O43559 492 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 DNPH1O43598 174 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 TPST1O60507 370 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 GCM2O75603 506 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-208ENST00000532560 PMS2P2O95744 297 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 CGAP01215 116 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 TFPIP10646 304 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 CPA2P48052 419 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 PCYT1AP49585 367 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 SORDQ00796 357 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 MYBPHQ13203 477 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 ERICH5Q6P6B1 374 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 GDF7Q7Z4P5 450 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 LUZP2Q86TE4 346 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 KIF18BQ86Y91 864 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 MCEMP1Q8IX19 187 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 SLC43A2Q8N370 569 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 CADM2Q8N3J6 435 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 ABHD3Q8WU67 409 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 UTP4Q969X6 686 aaKnown RBP13.43□□□□□ -0.26
CPSF1-208ENST00000532560 ARL5BQ96KC2 179 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
CPSF1-208ENST00000532560 OR11A1Q9GZK7 315 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 DCLRE1BQ9H816 532 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 BATF3Q9NR55 127 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 KLHL28Q9NXS3 571 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 KLHL13Q9P2N7 655 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 SLC13A4Q9UKG4 626 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 CRYBG3Q68DQ2 2970 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
CPSF1-208ENST00000532560 FAM220BPB1ANY3 271 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 SMAD9O15198 467 aaKnown RBP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 GYG2O15488 501 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CYTIPO60759 359 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 FESP07332 822 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ENPP1P22413 925 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CXCR1P25024 350 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 PRDX6P30041 224 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 AGTR1P30556 359 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CTBP2P56545 445 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 HACD2Q6Y1H2 254 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CCDC80Q76M96 950 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ATG4DQ86TL0 474 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ZNF295-AS1Q8N0V1 137 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 LSMEM1Q8N8F7 131 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 C3orf49Q96BT1 292 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 TAMM41Q96BW9 452 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CMTM5Q96DZ9 223 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ZHX1-C8orf76Q96EF9 292 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 C14orf79Q96F83 325 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 ZNF583Q96ND8 569 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 GPATCH1Q9BRR8 931 aaKnown RBP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 C1orf21Q9H246 121 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 KLHL9Q9P2J3 617 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 KCNN3Q9UGI6 736 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 TESQ9UGI8 421 aaKnown RBP13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CLEC4AQ9UMR7 237 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 PROCRQ9UNN8 238 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
CPSF1-208ENST00000532560 CELSR2Q9HCU4 2923 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 IGHV3-15A0A0B4J1V0 119 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 TMEM229AB2RXF0 380 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 M0QX08 132 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 AIM2O14862 343 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 PRKD3O94806 890 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 OPN1SWP03999 348 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 C8BP07358 591 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 PRF1P14222 555 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 CCNA2P20248 432 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 HTR2AP28223 471 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 HOXC5Q00444 222 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 VEZF1Q14119 521 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 NRF1Q16656 503 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 C8orf82Q6P1X6 216 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-208ENST00000532560 SMYD1Q8NB12 490 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 RASSF5Q8WWW0 418 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 MCUR1Q96AQ8 359 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 ARHGDIGQ99819 225 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 HOPXQ9BPY8 73 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-208ENST00000532560 PSD2Q9BQI7 771 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 ZNF559Q9BR84 538 aa13.41□□□□□ -0.26
CPSF1-208ENST00000532560 POTEKPQ9BYX7 375 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 536.3 ms