RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 WDR88Q6ZMY6 472 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 CPOQ8IVL8 374 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 PFN4Q8NHR9 129 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 MCFD2Q8NI22 146 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 SLC22A8Q8TCC7 542 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 AP3S1Q92572 193 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 TSLPQ969D9 159 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 EFHD2Q96C19 240 aaPredicted RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 OPALINQ96PE5 141 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 GAL3ST4Q96RP7 486 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ADOQ96SZ5 270 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 SECISBP2Q96T21 854 aaKnown RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 KCNN2Q9H2S1 579 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 NANSQ9NR45 359 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 NTNG1Q9Y2I2 539 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 NPFFR2Q9Y5X5 522 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 SPTBP11277 2137 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 LOC102723996A0A087X1L8 192 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ISPDA4D126 451 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ZNF670-ZNF695F2Z2N8 137 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 J3QRE1 110 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 HYAL3O43820 417 aaPredicted RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 PIP5K1CO60331 668 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 FADS1O60427 444 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 SLC25A12O75746 678 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 TXNDC12O95881 172 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 OR2T7P0C7T2 308 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ICAM2P13598 275 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 RORCP51449 518 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 BMXP51813 675 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 POLR2HP52434 150 aaKnown RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 SLC25A1P53007 311 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PLAURQ03405 335 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ITGADQ13349 1161 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 SNTA1Q13424 505 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 GALEQ14376 348 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 GGTLC2Q14390 218 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PON3Q15166 354 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PHF19Q5T6S3 580 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PWWP2BQ6NUJ5 590 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 MRPL14Q6P1L8 145 aaKnown RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 TMEM81Q6P7N7 255 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 C16orf87Q6PH81 154 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PAMR1Q6UXH9 720 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 GRINAQ7Z429 371 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 KCTD20Q7Z5Y7 419 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 PHC2Q8IXK0 858 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 NFAM1Q8NET5 270 aaPredicted RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 OR6Q1Q8NGQ2 317 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 OR2T27Q8NH04 317 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 TEAD3Q99594 435 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 CMKLR1Q99788 373 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 STRADBQ9C0K7 418 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 SLIRPQ9GZT3 109 aaKnown RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 NRIP3Q9NQ35 241 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 TRIM36Q9NQ86 728 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 HINT3Q9NQE9 182 aaKnown RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 C20orf141Q9NUB4 165 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ERVK13-1Q9NX77 482 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 CHRNA9Q9UGM1 479 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 ATXN7L1Q9ULK2 861 aaPredicted RBP11.23□□□□□ -0.61
CHD7-211ENST00000532149 POLHQ9Y253 713 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 UGT2A1Q9Y4X1 527 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 RP1P56715 2156 aa11.23□□□□□ -0.61
CHD7-211ENST00000532149 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 A0A1W2PQ72 361 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 HSPB2A8KAH6 182 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 A8MUA0 341 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CDK2AP1O14519 115 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 HCRTR2O43614 444 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 SNX4O95219 450 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 MT-ND5P03915 603 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CD14P08571 375 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 CD46P15529 392 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 F8A1P23610 371 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 EVI2BP34910 448 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
CHD7-211ENST00000532149 ETV6P41212 452 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 APOBEC1P41238 236 aaKnown RBP11.22□□□□□ -0.61
CHD7-211ENST00000532149 FOXC1Q12948 553 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 HSPB2Q16082 182 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 ZNF74Q16587 644 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.61
CHD7-211ENST00000532149 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
CHD7-211ENST00000532149 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 MS4A15Q8N5U1 240 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 SLC37A3Q8NCC5 494 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 OR13C2Q8NGS9 318 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 B4GALNT2Q8NHY0 566 aa11.22□□□□□ -0.61
CHD7-211ENST00000532149 DOK4Q8TEW6 326 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms