RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FFAR1O14842 300 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 THY1P04216 161 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 CELA3AP09093 270 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 PEPDP12955 493 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 CXCR1P25024 350 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 OR2T5Q6IEZ7 315 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 RNF113BQ8IZP6 322 aaKnown RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 CISD2Q8N5K1 135 aaKnown RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 OR2T29Q8NH02 315 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 OR6S1Q8NH40 331 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 DDIT4LQ96D03 193 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 POTEKPQ9BYX7 375 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 LDAHQ9H6V9 325 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 SLC7A7Q9UM01 511 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 NTNG1Q9Y2I2 539 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
COPB1-208ENST00000532088 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 HDGFL3Q9Y3E1 203 aa11.28□□□□□ -0.6
COPB1-208ENST00000532088 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 A8MVM7 634 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 J3KTA2 159 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 FZD7O75084 574 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 NPIPB7O75200 414 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 ENTPD5O75356 428 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 CPN1P15169 458 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 FASP25445 335 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 LIMS1P48059 325 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 CRYZQ08257 329 aaKnown RBP11.27□□□□□ -0.61
COPB1-208ENST00000532088 NFATC3Q12968 1075 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 PM20D2Q8IYS1 436 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 ACOT11Q8WXI4 607 aaPredicted RBP11.27□□□□□ -0.61
COPB1-208ENST00000532088 STMN2Q93045 179 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
COPB1-208ENST00000532088 SARAFQ96BY9 339 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 EPYCQ99645 322 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 FUZQ9BT04 418 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 PRDM14Q9GZV8 571 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 S100A14Q9HCY8 104 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 PAQR5Q9NXK6 330 aaPredicted RBP11.27□□□□□ -0.61
COPB1-208ENST00000532088 ZNF337Q9Y3M9 751 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 LIPGQ9Y5X9 500 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 CACNA1BQ00975 2339 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 NCKAP5O14513 1909 aa11.27□□□□□ -0.61
COPB1-208ENST00000532088 DSPP15924 2871 aaKnown RBP11.26□□□□□ -0.61
COPB1-208ENST00000532088 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 BCKDKO14874 412 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 CLOCKO15516 846 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 DNPH1O43598 174 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 OR2T1O43869 369 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 EFNA2O43921 213 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 GADD45GO95257 159 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 CST1P01037 141 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 LDLRP01130 860 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 ZNF708P17019 499 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 BMP7P18075 431 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 POU3F2P20265 443 aaPredicted RBP11.26□□□□□ -0.61
COPB1-208ENST00000532088 RRM2P31350 389 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
COPB1-208ENST00000532088 LHX2P50458 406 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 ELF3P78545 371 aaPredicted RBP11.26□□□□□ -0.61
COPB1-208ENST00000532088 SPIBQ01892 262 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 ATP6AP1Q15904 470 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 SYT14P1Q58G82 188 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
COPB1-208ENST00000532088 ESPNLQ6ZVH7 1005 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 LILRA2Q8N149 483 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 CPT1CQ8TCG5 803 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 NRBF2Q96F24 287 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 KLHL15Q96M94 604 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 NPAS1Q99742 590 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 BDH2Q9BUT1 245 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 EXO5Q9H790 373 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 REEP1Q9H902 201 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 ASF1BQ9NVP2 202 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 TRAPPC4Q9Y296 219 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 LYVE1Q9Y5Y7 322 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 ATMQ13315 3056 aa11.26□□□□□ -0.61
COPB1-208ENST00000532088 IGKV1D-42A0A075B6H8 117 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 TRAV36DV7A0A075B6V5 113 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 ARRDC5A6NEK1 342 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 H3BML4 177 aa11.25□□□□□ -0.61
COPB1-208ENST00000532088 H3BNX3 289 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms